RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 AP5M1Q9H0R1 490 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 ARMT1Q9H993 441 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 TNKSO95271 1327 aa13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 TRIP12Q14669 1992 aaPredicted RBP13.6□□□□□ -0.23
HLA-DOA-206ENST00000495532 USP34Q70CQ2 3546 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 DYNC1LI2O43237 492 aaPredicted RBP13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 ZEB2O60315 1214 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 BCAR3O75815 825 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 NDUFB10O96000 172 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 RFC2P35250 354 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
HLA-DOA-206ENST00000495532 MYH7P12883 1935 aa13.58□□□□□ -0.23
HLA-DOA-206ENST00000495532 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 SOWAHBA6NEL2 793 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 F5H6K3 240 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 ZBED4O75132 1171 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 SUPT20HL2P0C7V6 817 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 KCNA5P22460 613 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 KLRC3Q07444 240 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 Q9Y3F1 56 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 ZDBF2Q9HCK1 2354 aa13.58□□□□□ -0.24
HLA-DOA-206ENST00000495532 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 USP17L21D6R901 530 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 DCXO43602 365 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 MBD4O95243 580 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 OAZ1P54368 228 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 PTCRAQ6ISU1 281 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 KIFC2Q96AC6 838 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 PHOX2BQ99453 314 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 A1CFQ9NQ94 594 aaKnown RBP13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 ZNF536O15090 1300 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
HLA-DOA-206ENST00000495532 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 ASB14A6NK59 587 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 IQSEC1Q6DN90 963 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 TMCO2Q7Z6W1 182 aaPredicted RBP13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 AACSQ86V21 672 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 CLUAP1Q96AJ1 413 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 NYAP2Q9P242 653 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 CACNA1AO00555 2505 aa13.56□□□□□ -0.24
HLA-DOA-206ENST00000495532 TECTAO75443 2155 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 TRIOO75962 3097 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 GOLIM4O00461 696 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 WDR5P61964 334 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 HFE2Q6ZVN8 426 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 EEPD1Q7L9B9 569 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 FTOQ9C0B1 505 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 CTDP1Q9Y5B0 961 aaPredicted RBP13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 CFAP54Q96N23 3096 aa13.55□□□□□ -0.24
HLA-DOA-206ENST00000495532 ERVK-21P61565 698 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 CTR9Q6PD62 1173 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 AMOTL1Q8IY63 956 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 FEM1BQ9UK73 627 aa13.54□□□□□ -0.24
HLA-DOA-206ENST00000495532 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 RASA1P20936 1047 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 ADD2P35612 726 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 KCNJ6P48051 423 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 DEFB103AP81534 67 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 ZP2Q05996 745 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 GPNMBQ14956 572 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 RNF146Q9NTX7 359 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
HLA-DOA-206ENST00000495532 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 CHGBP05060 677 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 MYL3P08590 195 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms