RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 NSUN7Q8NE18 718 aaKnown RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 PHKBQ93100 1093 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 ERO1AQ96HE7 468 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 FGD4Q96M96 766 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 RNF26Q9BY78 433 aaPredicted RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
TRIT1-213ENST00000495175 GABRQQ9UN88 632 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
TRIT1-213ENST00000495175 ASTN1O14525 1302 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 ST18O60284 1047 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 COPB2P35606 906 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 FCGRTP55899 365 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 PFKFB3Q16875 520 aaPredicted RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 NCAPG2Q86XI2 1143 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 FBXO11Q86XK2 927 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 ABRAQ8N0Z2 381 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 ZSCAN31Q96LW9 406 aaPredicted RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
TRIT1-213ENST00000495175 A1CFQ9NQ94 594 aaKnown RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.34
TRIT1-213ENST00000495175 ABCB11O95342 1321 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
TRIT1-213ENST00000495175 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
TRIT1-213ENST00000495175 COBLO75128 1261 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 GNRH1P01148 92 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 HOXC6P09630 235 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 ALAS1P13196 640 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 PRKCZQ05513 592 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 USH1GQ495M9 461 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 SNX21Q969T3 373 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 COA7Q96BR5 231 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
TRIT1-213ENST00000495175 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 SRRDQ9UH36 339 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
TRIT1-213ENST00000495175 STXBP3O00186 592 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 STRNO43815 780 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 JAK2O60674 1132 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
TRIT1-213ENST00000495175 ADORA2AP29274 412 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 MCM2P49736 904 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 CUL4AQ13619 759 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 GPKOWQ92917 476 aaPredicted RBP eCLIP12.88□□□□□ -0.351e-8■□□□□ 9.6
TRIT1-213ENST00000495175 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 MAF1Q9H063 256 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
TRIT1-213ENST00000495175 SCG2P13521 617 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 FLT3LGP49771 235 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 HSD17B4P51659 736 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 IRF5Q13568 498 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 KIF22Q14807 665 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 NPY5RQ15761 445 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 SLC30A10Q6XR72 485 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
TRIT1-213ENST00000495175 NPLOC4Q8TAT6 608 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
TRIT1-213ENST00000495175 MMP19Q99542 508 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 FLRT1Q9NZU1 646 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
TRIT1-213ENST00000495175 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
TRIT1-213ENST00000495175 BRCA2P51587 3418 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 MEIS2O14770 477 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 DEXIO95424 95 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 PGK2P07205 417 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 FCER1AP12319 257 aa12.86□□□□□ -0.35
TRIT1-213ENST00000495175 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
TRIT1-213ENST00000495175 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms