RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ASTN1O14525 1302 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 A0A0D9SFI3 127 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 ARVCFO00192 962 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 CCDC96Q2M329 555 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 MCMDC2Q4G0Z9 681 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 CYP39A1Q9NYL5 469 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 CCPG1Q9ULG6 757 aa26.09■■□□□ 1.77
HDDC3-203ENST00000494993 FGAP02671 866 aa26.08■■□□□ 1.77
HDDC3-203ENST00000494993 BEX3Q00994 111 aa26.08■■□□□ 1.77
HDDC3-203ENST00000494993 TICAM2Q86XR7 235 aa26.08■■□□□ 1.77
HDDC3-203ENST00000494993 TOMM22Q9NS69 142 aa26.08■■□□□ 1.77
HDDC3-203ENST00000494993 GNEQ9Y223 722 aaKnown RBP26.08■■□□□ 1.77
HDDC3-203ENST00000494993 EYSQ5T1H1 3165 aa26.08■■□□□ 1.77
HDDC3-203ENST00000494993 ICAM1P05362 532 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 MFSD5Q6N075 450 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 NOL8Q76FK4 1167 aaKnown RBP26.07■■□□□ 1.76
HDDC3-203ENST00000494993 TLK2Q86UE8 772 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.07■■□□□ 1.76
HDDC3-203ENST00000494993 FAM126BQ8IXS8 530 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 RANBP17Q9H2T7 1088 aaKnown RBP26.07■■□□□ 1.76
HDDC3-203ENST00000494993 ZMYM6O95789 1325 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 LAMA4Q16363 1823 aa26.07■■□□□ 1.76
HDDC3-203ENST00000494993 TMEM265A0A087WTH1 108 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 TLR3O15455 904 aaKnown RBP26.06■■□□□ 1.76
HDDC3-203ENST00000494993 HSPD1P10809 573 aaKnown RBP26.06■■□□□ 1.76
HDDC3-203ENST00000494993 RRP12Q5JTH9 1297 aaKnown RBP26.06■■□□□ 1.76
HDDC3-203ENST00000494993 TTBK2Q6IQ55 1244 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 BTNL9Q6UXG8 535 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 NSMFQ6X4W1 530 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 TMEM47Q9BQJ4 181 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 TCP11L1Q9NUJ3 509 aa26.06■■□□□ 1.76
HDDC3-203ENST00000494993 DDX49Q9Y6V7 483 aaKnown RBP26.06■■□□□ 1.76
HDDC3-203ENST00000494993 TOP1P11387 765 aaKnown RBP26.05■■□□□ 1.76
HDDC3-203ENST00000494993 PPIGQ13427 754 aaKnown RBP eCLIP26.05■■□□□ 1.76
HDDC3-203ENST00000494993 MYLIPQ8WY64 445 aa26.05■■□□□ 1.76
HDDC3-203ENST00000494993 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.05■■□□□ 1.76
HDDC3-203ENST00000494993 SMPD1P17405 629 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 SLC16A2P36021 539 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 NMIQ13287 307 aaPredicted RBP26.04■■□□□ 1.76
HDDC3-203ENST00000494993 SYDE2Q5VT97 1194 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 TAPT1Q6NXT6 567 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 CXCL17Q6UXB2 119 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 ZNF589Q86UQ0 364 aaPredicted RBP26.04■■□□□ 1.76
HDDC3-203ENST00000494993 FBXO16Q8IX29 292 aaPredicted RBP26.04■■□□□ 1.76
HDDC3-203ENST00000494993 AP5M1Q9H0R1 490 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 PDGFCQ9NRA1 345 aa26.04■■□□□ 1.76
HDDC3-203ENST00000494993 MYO9BQ13459 2157 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.03■■□□□ 1.76
HDDC3-203ENST00000494993 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.03■■□□□ 1.76
HDDC3-203ENST00000494993 CABYRO75952 493 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 FSCN1Q16658 493 aaKnown RBP26.03■■□□□ 1.76
HDDC3-203ENST00000494993 IQSEC1Q6DN90 963 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 EEPD1Q7L9B9 569 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 MAFAQ8NHW3 353 aaPredicted RBP26.03■■□□□ 1.76
HDDC3-203ENST00000494993 MORC4Q8TE76 937 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 LNPKQ9C0E8 428 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 VTA1Q9NP79 307 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 FRMPD2Q68DX3 1309 aaPredicted RBP26.03■■□□□ 1.76
HDDC3-203ENST00000494993 CCDC171Q6TFL3 1326 aa26.03■■□□□ 1.76
HDDC3-203ENST00000494993 GBF1Q92538 1859 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 TRIM6-TRIM34B2RNG4 842 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 DYNC1LI2O43237 492 aaPredicted RBP26.02■■□□□ 1.76
HDDC3-203ENST00000494993 CD4P01730 458 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 PTGS1P23219 599 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 HAND2P61296 217 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 TMEM199Q8N511 208 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 SLC43A3Q8NBI5 491 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 PURBQ96QR8 312 aaKnown RBP26.02■■□□□ 1.76
HDDC3-203ENST00000494993 PPP1R12CQ9BZL4 782 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 GPCPD1Q9NPB8 672 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 Q9Y3F1 56 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 MYH6P13533 1939 aa26.02■■□□□ 1.76
HDDC3-203ENST00000494993 CSF2RAP15509 400 aa26.01■■□□□ 1.75
HDDC3-203ENST00000494993 DNAJB2P25686 324 aa26.01■■□□□ 1.75
HDDC3-203ENST00000494993 BAATQ14032 418 aaPredicted RBP26.01■■□□□ 1.75
HDDC3-203ENST00000494993 TMEM240Q5SV17 173 aa26.01■■□□□ 1.75
HDDC3-203ENST00000494993 C16orf59Q7L2K0 433 aa26.01■■□□□ 1.75
HDDC3-203ENST00000494993 PRUNE2Q8WUY3 3088 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 NFIBO00712 420 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 ZEB2O60315 1214 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 PDHBP11177 359 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 FOSL2P15408 326 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 ITGA7Q13683 1181 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 AKNAD1Q5T1N1 836 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 RILPL2Q969X0 211 aa26■■□□□ 1.75
HDDC3-203ENST00000494993 ADD3Q9UEY8 706 aaKnown RBP26■■□□□ 1.75
HDDC3-203ENST00000494993 PCP11498 1178 aaKnown RBP25.99■■□□□ 1.75
HDDC3-203ENST00000494993 ALDH5A1P51649 535 aaPredicted RBP25.99■■□□□ 1.75
HDDC3-203ENST00000494993 TMEM63BQ5T3F8 832 aa25.99■■□□□ 1.75
HDDC3-203ENST00000494993 MFSD6Q6ZSS7 791 aa25.99■■□□□ 1.75
HDDC3-203ENST00000494993 KIAA1211Q6ZU35 1233 aa25.99■■□□□ 1.75
HDDC3-203ENST00000494993 TTC14Q96N46 770 aa25.99■■□□□ 1.75
HDDC3-203ENST00000494993 COL25A1Q9BXS0 654 aaPredicted RBP25.99■■□□□ 1.75
HDDC3-203ENST00000494993 SEZ6LQ9BYH1 1024 aa25.99■■□□□ 1.75
HDDC3-203ENST00000494993 GRIN2DO15399 1336 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 LOC102724159A0A0B4J2E5 919 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 CYP2C18P33260 490 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 AAMPQ13685 434 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 PWP2Q15269 919 aaKnown RBP25.98■■□□□ 1.75
HDDC3-203ENST00000494993 RASIP1Q5U651 963 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms