RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ZNF214Q9UL59 606 aaPredicted RBP17.8■□□□□ 0.44
CHMP2B-205ENST00000494980 FAM208BQ5VWN6 2430 aa17.8■□□□□ 0.44
CHMP2B-205ENST00000494980 DNAJC25-GNG10A0A024R161 153 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 MPHOSPH10O00566 681 aaKnown RBP17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 PTGS1P23219 599 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 NBL1P41271 181 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 PTPROQ16827 1216 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 BANK1Q8NDB2 785 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 C17orf80Q9BSJ5 609 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 FBXO28Q9NVF7 368 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 ADAMTS5Q9UNA0 930 aa17.79■□□□□ 0.44
CHMP2B-205ENST00000494980 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 MCAMP43121 646 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 TNFAIP2Q03169 654 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 CRBNQ96SW2 442 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 RAD9AQ99638 391 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
CHMP2B-205ENST00000494980 STXBP3O00186 592 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 VWA5AO00534 786 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 MBTPS2O43462 519 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 ZEB2O60315 1214 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 GJB5O95377 273 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 LTBRP36941 435 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 RPAINQ86UA6 219 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 MAGEB6Q8N7X4 407 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 RMDN1Q96DB5 314 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 FGD4Q96M96 766 aa17.77■□□□□ 0.44
CHMP2B-205ENST00000494980 NLRC5Q86WI3 1866 aa17.77■□□□□ 0.43
CHMP2B-205ENST00000494980 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 ARID4AP29374 1257 aaPredicted RBP17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 USP5P45974 858 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 GORABQ5T7V8 394 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 NKD2Q969F2 451 aaPredicted RBP17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 AP5M1Q9H0R1 490 aa17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 GNEQ9Y223 722 aaKnown RBP17.76■□□□□ 0.43
CHMP2B-205ENST00000494980 SETXQ7Z333 2677 aaKnown RBP17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 GALR2O43603 387 aaPredicted RBP17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 SIGLEC14Q08ET2 396 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 FRMD5Q7Z6J6 570 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 RETREG2Q8NC44 543 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 VCPKMTQ9H867 229 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
CHMP2B-205ENST00000494980 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 PLCD1P51178 756 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 TFCP2Q12800 502 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 SNRNP48Q6IEG0 339 aaKnown RBP17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 FAM117BQ6P1L5 589 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 ASIC4Q96FT7 647 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 NSUN3Q9H649 340 aaKnown RBP17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 PPP1R9AQ9ULJ8 1098 aa17.74■□□□□ 0.43
CHMP2B-205ENST00000494980 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 TEX13BQ9BXU2 312 aa17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 SNRKQ9NRH2 765 aa17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 RIPK3Q9Y572 518 aa17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
CHMP2B-205ENST00000494980 NUBP1P53384 320 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 COL9A2Q14055 689 aaPredicted RBP17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 FAM47CQ5HY64 1035 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 SH2D4AQ9H788 454 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 ARHGEF10LQ9HCE6 1279 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 TMX2Q9Y320 296 aa17.72■□□□□ 0.43
CHMP2B-205ENST00000494980 SMPD1P17405 629 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 NBPF20Q3BBV1 942 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 PPP1R13LQ8WUF5 828 aa17.71■□□□□ 0.43
CHMP2B-205ENST00000494980 EVX2Q03828 476 aa17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 ICA1Q05084 483 aa17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 CTC1Q2NKJ3 1217 aa17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 EPC2Q52LR7 807 aa17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 COL26A1Q96A83 441 aa17.7■□□□□ 0.42
CHMP2B-205ENST00000494980 TBX10O75333 385 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 PDGFBP01127 241 aaPredicted RBP17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 GABPAQ06546 454 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 GPM6BQ13491 265 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 BFSP2Q13515 415 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 RALGAPA2Q2PPJ7 1873 aa17.69■□□□□ 0.42
CHMP2B-205ENST00000494980 LOC730098B7Z3J9 87 aa17.68■□□□□ 0.42
CHMP2B-205ENST00000494980 NCK2O43639 380 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms