RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
PKP4-215ENST00000494945 CATSPERGQ6ZRH7 1159 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 PIK3AP1Q6ZUJ8 805 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
PKP4-215ENST00000494945 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 IRF6O14896 467 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 SPTLC2O15270 562 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 ZBED4O75132 1171 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 PPP6R2O75170 966 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 CELF2O95319 508 aaKnown RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 DSG3P32926 999 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 CLK2P49760 499 aaKnown RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
PKP4-215ENST00000494945 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
PKP4-215ENST00000494945 PTPAQ15257 358 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 KLHL40Q2TBA0 621 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 USH1GQ495M9 461 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 TTC38Q5R3I4 469 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 ADAMTS5Q9UNA0 930 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
PKP4-215ENST00000494945 ZNF536O15090 1300 aa12.6□□□□□ -0.39
PKP4-215ENST00000494945 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 VWA5AO00534 786 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 OAZ1P54368 228 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 PABPC4Q13310 644 aaKnown RBP eCLIP12.59□□□□□ -0.39
PKP4-215ENST00000494945 AP3B2Q13367 1082 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 ORC2Q13416 577 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 FASTKD5Q7L8L6 764 aaKnown RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
PKP4-215ENST00000494945 CCPG1Q9ULG6 757 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 PCDHB6Q9Y5E3 794 aa12.59□□□□□ -0.39
PKP4-215ENST00000494945 MGAMO43451 1857 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
PKP4-215ENST00000494945 ME1P48163 572 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 SNAPC2Q13487 334 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 UBE2SQ16763 222 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 INF2Q27J81 1249 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 TREML2Q5T2D2 321 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 SAMD3Q8N6K7 520 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 GPT2Q8TD30 523 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
PKP4-215ENST00000494945 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
PKP4-215ENST00000494945 MEIS2O14770 477 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 OPLAHO14841 1288 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
PKP4-215ENST00000494945 ATP2B1P20020 1258 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 GJA5P36382 358 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 GHRHRQ02643 423 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 CST9Q5W186 159 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 NEK8Q86SG6 692 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 MB21D1Q8N884 522 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
PKP4-215ENST00000494945 MAP3K20Q9NYL2 800 aaKnown RBP12.57□□□□□ -0.4
PKP4-215ENST00000494945 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 DOCK5Q9H7D0 1870 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 LRRC37A2A6NM11 1700 aa12.57□□□□□ -0.4
PKP4-215ENST00000494945 MCM3APO60318 1980 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 GCOM1H8Y6P7 765 aaPredicted RBP12.56□□□□□ -0.4
PKP4-215ENST00000494945 LAD1O00515 517 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 CUTAO60888 179 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 CETPP11597 493 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 GTF2A2P52657 109 aa12.56□□□□□ -0.4
PKP4-215ENST00000494945 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms