RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 CDC25BP30305 580 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 ZNF174Q15697 407 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 SNCAIPQ9Y6H5 919 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
SHISA5-216ENST00000494854 KLRF2D3W0D1 207 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 ADAMTS3O15072 1205 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
SHISA5-216ENST00000494854 GOLGA8HP0CJ92 632 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 MS4A4AQ96JQ5 239 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 SPZ1Q9BXG8 430 aa17.75■□□□□ 0.43
SHISA5-216ENST00000494854 OSBPL5Q9H0X9 879 aaPredicted RBP17.75■□□□□ 0.43
SHISA5-216ENST00000494854 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
SHISA5-216ENST00000494854 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 ISM2Q6H9L7 571 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 TYW1BQ6NUM6 668 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 MRFAP1L1Q96HT8 127 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 SWAP70Q9UH65 585 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 COL2A1P02458 1487 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 OFD1O75665 1012 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 GTF2A2P52657 109 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 ATP2C1P98194 919 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 PTGDRQ13258 359 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 NOL9Q5SY16 702 aaKnown RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 KCNF1Q9H3M0 494 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 PCDHA5Q9Y5H7 936 aa17.74■□□□□ 0.43
SHISA5-216ENST00000494854 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-216ENST00000494854 SMTNL1A8MU46 457 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 IGF2BP3O00425 579 aaKnown RBP eCLIP17.73■□□□□ 0.43
SHISA5-216ENST00000494854 POSTNQ15063 836 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 GALNT17Q6IS24 598 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 USP17L2Q6R6M4 530 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 FAM177A1Q8N128 213 aaPredicted RBP17.73■□□□□ 0.43
SHISA5-216ENST00000494854 PDILTQ8N807 584 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 DAGLBQ8NCG7 672 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 MTMR4Q9NYA4 1195 aa17.73■□□□□ 0.43
SHISA5-216ENST00000494854 DDTLA6NHG4 134 aaPredicted RBP17.72■□□□□ 0.43
SHISA5-216ENST00000494854 M0R2N6 131 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 STXBP3O00186 592 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
SHISA5-216ENST00000494854 TBC1D12O60347 775 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 AKR1B1P15121 316 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 INPP5BP32019 993 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PPATQ06203 517 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PPIL2Q13356 520 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.72■□□□□ 0.43
SHISA5-216ENST00000494854 CCDC186Q7Z3E2 898 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 ZSCAN29Q8IWY8 852 aaPredicted RBP17.72■□□□□ 0.43
SHISA5-216ENST00000494854 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PTPN18Q99952 460 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 SIPA1L1O43166 1804 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 IGKV6D-41A0A0C4DH26 115 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PHF20L1A8MW92 1017 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 HLA-DOAP06340 250 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 PTGS1P23219 599 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 EPSTI1Q96J88 318 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 CPVLQ9H3G5 476 aa17.72■□□□□ 0.43
SHISA5-216ENST00000494854 GPR25O00155 361 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 IKBKBO14920 756 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 TPM4P67936 248 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 NCAPHQ15003 741 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
SHISA5-216ENST00000494854 NRBP1Q9UHY1 535 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 PCDHA6Q9UN73 950 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 PCDHA8Q9Y5H6 950 aa17.71■□□□□ 0.43
SHISA5-216ENST00000494854 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 VWA3AA6NCI4 1184 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 USP17L5A8MUK1 530 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 PRR29P0C7W0 189 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 MCM7P33993 719 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 SHMT1P34896 483 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 NT5DC1Q5TFE4 455 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 RASGRP4Q8TDF6 673 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 ZNF296Q8WUU4 475 aaPredicted RBP17.7■□□□□ 0.42
SHISA5-216ENST00000494854 BRI3BPQ8WY22 251 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
SHISA5-216ENST00000494854 A0A087X0B3 334 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 CCL15-CCL14A0A0B4J2E2 113 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 IRF6O14896 467 aa17.7■□□□□ 0.42
SHISA5-216ENST00000494854 PDHBP11177 359 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms