RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SPDYE4A6NLX3 237 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 CDC25BP30305 580 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 LONP1P36776 959 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 RASA3Q14644 834 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 USP49Q70CQ1 688 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 NEK8Q86SG6 692 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 C16orf45Q96MC5 204 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 GLT8D2Q9H1C3 349 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 TMX2Q9Y320 296 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 BMP3P12645 472 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 CAP2P40123 477 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 IQCB1Q15051 598 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 BTNL9Q6UXG8 535 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 EPSTI1Q96J88 318 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 PYM1Q9BRP8 204 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 CNOT7Q9UIV1 285 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 GJA3Q9Y6H8 435 aa20.99■□□□□ 0.95
TSPAN4-212ENST00000494815 ACTN4O43707 911 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 PRPHP41219 470 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 NLRP12P59046 1061 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 MDM2Q00987 491 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 QRICH1Q2TAL8 776 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 CUL5Q93034 780 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 GOPCQ9HD26 462 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 BIN2Q9UBW5 565 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 PAXBP1Q9Y5B6 917 aa20.98■□□□□ 0.95
TSPAN4-212ENST00000494815 KIF20AO95235 890 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 EGFRP00533 1210 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 TNNT1P13805 278 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 CDC37Q16543 378 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 MIGA2Q7L4E1 593 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 SH2D4AQ9H788 454 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 PNOCQ13519 176 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 POSTNQ15063 836 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 TBCKQ8TEA7 893 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 BPIFA3Q9BQP9 254 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 SERTAD1Q9UHV2 236 aa20.97■□□□□ 0.95
TSPAN4-212ENST00000494815 ASNSP08243 561 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 IL17AQ16552 155 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 JAKMIP3Q5VZ66 844 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 DTHD1Q6ZMT9 781 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 PDILTQ8N807 584 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 TEPSINQ96N21 525 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 SLFN14P0C7P3 912 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 CLK2P49760 499 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 LETM2Q2VYF4 491 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 NUP88Q99567 741 aaPredicted RBP20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 PSTPIP2Q9H939 334 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 ZNF541Q9H0D2 1346 aa20.96■□□□□ 0.95
TSPAN4-212ENST00000494815 TMEM232C9JQI7 657 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 GOLGA6L19H0YKK7 550 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 ECE1P42892 770 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 KIF4BQ2VIQ3 1234 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 SAMD7Q7Z3H4 446 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 ACER1Q8TDN7 264 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 CACTINQ8WUQ7 758 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 PCDHA1Q9Y5I3 950 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 A0A087X0B3 334 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 NEMFO60524 1076 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 CCNT1O60563 726 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 TBC1D10BQ4KMP7 808 aaPredicted RBP20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 NT5DC1Q5TFE4 455 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 SARM1Q6SZW1 724 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 AMNQ9BXJ7 453 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 TMEM60Q9H2L4 133 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 GINM1Q9NU53 330 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 TMEM260Q9NX78 707 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 OGFRQ9NZT2 677 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 PCDHA5Q9Y5H7 936 aa20.95■□□□□ 0.94
TSPAN4-212ENST00000494815 A0A087WWV3 80 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 BECN2A8MW95 431 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 BIN1O00499 593 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 LMNB1P20700 586 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 TXLNAP40222 546 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 IKQ13123 557 aaPredicted RBP20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 DHX58Q96C10 678 aa20.94■□□□□ 0.94
TSPAN4-212ENST00000494815 PHF20L1A8MW92 1017 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 H7C1D1 291 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 OR52Z1P0C646 297 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 TPD52L1Q16890 204 aaPredicted RBP20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 CCDC144BQ3MJ40 725 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 IQUBQ8NA54 791 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 CCDC112Q8NEF3 446 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 VCPKMTQ9H867 229 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 CGNQ9P2M7 1197 aaKnown RBP20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 HACL1Q9UJ83 578 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 STAT2P52630 851 aa20.93■□□□□ 0.94
TSPAN4-212ENST00000494815 FOXN1O15353 648 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 TRAF1Q13077 416 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 MCTP2Q6DN12 878 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 SH3RF1Q7Z6J0 888 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 SPICE1Q8N0Z3 855 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 TRIML1Q8N9V2 468 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 SPATA20Q8TB22 786 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 AK8Q96MA6 479 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms