RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 IDO1P14902 403 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ATP6V1C1P21283 382 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PPP2R2AP63151 447 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 IDI1Q13907 227 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 QPCTQ16769 361 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 LRRC43Q8N309 656 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 FAM136AQ96C01 138 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TCEANC2Q96MN5 208 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TSPAN18Q96SJ8 248 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 FSD1Q9BTV5 496 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TAOK2Q9UL54 1235 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ATRNO75882 1429 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 PDS5AQ29RF7 1337 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 PNPLA7Q6ZV29 1317 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 DLEC1Q9Y238 1755 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 O00370 1275 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SKAP2O75563 359 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 YY1P25490 414 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 USP6P35125 1406 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CUL1Q13616 776 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 E2F5Q15329 346 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 PARP6Q2NL67 630 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ANKRD20A2Q5SQ80 823 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ANKRD20A1Q5TYW2 823 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ANKRD20A3Q5VUR7 823 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SULT6B1Q6IMI4 303 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 LCA5Q86VQ0 697 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ANKS4BQ8N8V4 417 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC197Q8NCU1 140 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 LTV1Q96GA3 475 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ZRANB1Q9UGI0 708 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 FLT4P35916 1363 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 RICTORQ6R327 1708 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 A0A0G2JS52 829 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 E7EWF7 191 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 PYGLP06737 847 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CYLC1P35663 651 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 HDGFP51858 240 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 COPB1P53618 953 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SEC24CP53992 1094 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SNX1Q13596 522 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 MTMR3Q13615 1198 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 RASA3Q14644 834 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 MTHFSDQ2M296 383 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 OR52E8Q6IFG1 317 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ANO7Q6IWH7 933 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC129Q6ZRS4 1044 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 AACSQ86V21 672 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 STK11IPQ8N1F8 1099 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ARHGAP18Q8N392 663 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 RNF10Q8N5U6 811 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 RAPGEF5Q92565 580 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 TIPINQ9BVW5 301 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 AATFQ9NY61 560 aaKnown RBP eCLIP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ATXN10Q9UBB4 475 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 HDAC6Q9UBN7 1215 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CEP131Q9UPN4 1083 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SRPRBQ9Y5M8 271 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 LRRD1A4D1F6 860 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 PIM1P11309 404 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ECHS1P30084 290 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 C2orf54Q08AI8 447 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 DPYDQ12882 1025 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 MYBPC3Q14896 1274 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 KRT31Q15323 416 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 TNFAIP8L3Q5GJ75 292 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 IRGCQ6NXR0 463 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 MB21D2Q8IYB1 491 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SH2D3CQ8N5H7 860 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 CHMP6Q96FZ7 201 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SEC62Q99442 399 aaKnown RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 LZTS2Q9BRK4 669 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 TMEM109Q9BVC6 243 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 TXLNGYQ9BZA5 131 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ISCUQ9H1K1 167 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 THAP9Q9H5L6 903 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 SH2D4AQ9H788 454 aa5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ZBTB12Q9Y330 459 aaPredicted RBP5.31□□□□□ -1.56
PRKD3-210ENST00000494667 ADAMTSL3P82987 1691 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 MAP3K19Q56UN5 1328 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RBAK-RBAKDNI3L0D1 243 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC166P0CW27 439 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 NCALDP61601 193 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 BNIP1Q12981 228 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 OS9Q13438 667 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 PLS1Q14651 629 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 LRRC23Q53EV4 343 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC178Q5BJE1 867 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC181Q5TID7 509 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 NME9Q86XW9 330 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC43Q96MW1 224 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 HAPLN3Q96S86 360 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 PYM1Q9BRP8 204 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms