RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CRAMP1Q96RY5 1269 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
CHMP3-209ENST00000494623 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-209ENST00000494623 KIF5CO60282 957 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 PDE4DQ08499 809 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-209ENST00000494623 AK8Q96MA6 479 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-209ENST00000494623 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 TRIM37O94972 964 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 MYL1P05976 194 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 SMARCA1P28370 1054 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 SCNN1DP51172 638 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ASIC1P78348 528 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 MB21D1Q8N884 522 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
CHMP3-209ENST00000494623 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 DDX4Q9NQI0 724 aaKnown RBP12.58□□□□□ -0.4
CHMP3-209ENST00000494623 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 TTF2Q9UNY4 1162 aaKnown RBP12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ABL1P00519 1130 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
CHMP3-209ENST00000494623 TRIM9Q9C026 710 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 ZSWIM4Q9H7M6 989 aa12.58□□□□□ -0.4
CHMP3-209ENST00000494623 EP400Q96L91 3159 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 STK4Q13043 487 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CYP26C1Q6V0L0 522 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 KRT222Q8N1A0 295 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CSGALNACT2Q8N6G5 542 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CHP1Q99653 195 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
CHMP3-209ENST00000494623 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 FCER1AP12319 257 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 NOVP48745 357 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 TRIM14Q14142 442 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 MMTAG2Q9BU76 263 aaKnown RBP12.57□□□□□ -0.4
CHMP3-209ENST00000494623 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 CUEDC2Q9H467 287 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
CHMP3-209ENST00000494623 ARGLU1Q9NWB6 273 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-209ENST00000494623 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-209ENST00000494623 MPHOSPH10O00566 681 aaKnown RBP12.56□□□□□ -0.4
CHMP3-209ENST00000494623 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 EEF1GP26641 437 aaKnown RBP12.56□□□□□ -0.4
CHMP3-209ENST00000494623 ADCY7P51828 1080 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 BMS1Q14692 1282 aaKnown RBP12.56□□□□□ -0.4
CHMP3-209ENST00000494623 CALCRLQ16602 461 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 TTI2Q6NXR4 508 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-209ENST00000494623 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
CHMP3-209ENST00000494623 LRWD1Q9UFC0 647 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 B4DLN1 442 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 G3V3G9 751 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 TDP2O95551 362 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 FECHP22830 423 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 AMPD3Q01432 767 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 GABPAQ06546 454 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 TMCO3Q6UWJ1 677 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 P2RX5Q93086 422 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 C7orf25Q9BPX7 421 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
CHMP3-209ENST00000494623 RAD21O60216 631 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 SLC16A2P36021 539 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 DMTNQ08495 405 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 SLC35F6Q8N357 371 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 TUBGCP2Q9BSJ2 902 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 MAGEF1Q9HAY2 307 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
CHMP3-209ENST00000494623 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
CHMP3-209ENST00000494623 ESYT2A0FGR8 921 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-209ENST00000494623 SLC37A4O43826 429 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 TTLL1O95922 423 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 CCNE1P24864 410 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 TNNI2P48788 182 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 UBE2SQ16763 222 aa12.55□□□□□ -0.4
CHMP3-209ENST00000494623 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms