RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 NUP43Q8NFH3 380 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 JMJD8Q96S16 334 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 PLCD4Q9BRC7 762 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 TRIM55Q9BYV6 548 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 EPN3Q9H201 632 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 ST7Q9NRC1 585 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 ACSL6Q9UKU0 697 aa8.21□□□□□ -1.1
NCL-210ENST00000494618 L1CAMP32004 1257 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 RBM10P98175 930 aaKnown RBP8.2□□□□□ -1.1
NCL-210ENST00000494618 TRIM59Q8IWR1 403 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
NCL-210ENST00000494618 SLC26A8Q96RN1 970 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 MCMBPQ9BTE3 642 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 GOLGA2P5Q9HBQ8 144 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 IMPACTQ9P2X3 320 aa8.2□□□□□ -1.1
NCL-210ENST00000494618 A0A1W2PQJ5 194 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 U2SURPO15042 1029 aaKnown RBP8.19□□□□□ -1.1
NCL-210ENST00000494618 KLF4O43474 513 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 PAMP19021 973 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 DDR2Q16832 855 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 SYDE1Q6ZW31 735 aaPredicted RBP8.19□□□□□ -1.1
NCL-210ENST00000494618 ZNF605Q86T29 641 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 ZNF552Q9H707 407 aaPredicted RBP8.19□□□□□ -1.1
NCL-210ENST00000494618 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
NCL-210ENST00000494618 MPOP05164 745 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 C8AP07357 584 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.13e-16■□□□□ 9.9
NCL-210ENST00000494618 CEBPAP49715 358 aaPredicted RBP8.18□□□□□ -1.1
NCL-210ENST00000494618 CORO7P57737 925 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 TMEM62Q0P6H9 643 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 RAB33AQ14088 237 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 OLFML2BQ68BL8 750 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 GTF2IRD2BQ6EKJ0 949 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
NCL-210ENST00000494618 GTF2IRD2Q86UP8 949 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 MRGPRX3Q96LB0 322 aa8.18□□□□□ -1.1
NCL-210ENST00000494618 NPHP3-ACAD11A0A0J9YXS1 232 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 ABLIM1O14639 778 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 PEX10O60683 326 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 EFEMP2O95967 443 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 ITGAVP06756 1048 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
NCL-210ENST00000494618 ERVFRD-1P60508 538 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 SCRN1Q12765 414 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 CELF2-AS1Q8N7Q2 184 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 KCNN1Q92952 543 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
NCL-210ENST00000494618 NKX2-4Q9H2Z4 354 aa8.17□□□□□ -1.1
NCL-210ENST00000494618 HOXC12P31275 282 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 KIR3DS1Q14943 382 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 SF3A1Q15459 793 aaKnown RBP8.16□□□□□ -1.1
NCL-210ENST00000494618 ZNF227Q86WZ6 799 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 COPS5Q92905 334 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 CCDC140Q96MF4 163 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 PDLIM7Q9NR12 457 aa8.16□□□□□ -1.1
NCL-210ENST00000494618 HRKO00198 91 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 NFIBO00712 420 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 MVKQ03426 396 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 NBPF4Q96M43 638 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 KCNK12Q9HB15 430 aa8.15□□□□□ -1.1
NCL-210ENST00000494618 IQCA1LA6NCM1 817 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 SEMA7AO75326 666 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 CPP00450 1065 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 SLC10A6Q3KNW5 377 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 IQCEQ6IPM2 695 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 CPNE8Q86YQ8 564 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 BTN2A2Q8WVV5 523 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 LGR4Q9BXB1 951 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 TNFRSF12AQ9NP84 129 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 GPRC5CQ9NQ84 441 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
NCL-210ENST00000494618 NPHS1O60500 1241 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 TSPAN15O95858 294 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 SNRPB2P08579 225 aaKnown RBP8.13□□□□□ -1.11
NCL-210ENST00000494618 PLS3P13797 630 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 SDHBP21912 280 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 KCNJ6P48051 423 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 NR1I3Q14994 352 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 ZNF124Q15973 351 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 BICRALQ6AI39 1079 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 NPM2Q86SE8 214 aaKnown RBP8.13□□□□□ -1.11
NCL-210ENST00000494618 CABP7Q86V35 215 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 ST13P5Q8NFI4 369 aaPredicted RBP8.13□□□□□ -1.11
NCL-210ENST00000494618 MMP19Q99542 508 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 MCOLN1Q9GZU1 580 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
NCL-210ENST00000494618 TEX51A0A1B0GUA7 166 aa8.12□□□□□ -1.11
NCL-210ENST00000494618 THBDP07204 575 aa8.12□□□□□ -1.11
NCL-210ENST00000494618 MSL3P1P0C860 447 aa8.12□□□□□ -1.11
NCL-210ENST00000494618 GLDCP23378 1020 aa8.12□□□□□ -1.11
NCL-210ENST00000494618 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms