RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
TRIM59-206ENST00000494486 MCAMP43121 646 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 DEFB103AP81534 67 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 FRMD5Q7Z6J6 570 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM59-206ENST00000494486 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 BAHCC1Q9P281 2608 aa13.37□□□□□ -0.27
TRIM59-206ENST00000494486 ABHD14A-ACY1A0A1B0GW23 586 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 H3BNC9 293 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 MPHOSPH10O00566 681 aaKnown RBP13.36□□□□□ -0.27
TRIM59-206ENST00000494486 EFCAB14O75071 495 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
TRIM59-206ENST00000494486 USP5P45974 858 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 CBX2Q14781 532 aaPredicted RBP13.36□□□□□ -0.27
TRIM59-206ENST00000494486 CLUL1Q15846 466 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 ST3GAL2Q16842 350 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 GORABQ5T7V8 394 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 REPS2Q8NFH8 660 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
TRIM59-206ENST00000494486 GPM6BQ13491 265 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 CNKSR3Q6P9H4 555 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 TMEM179Q6ZVK1 233 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 NEUROD6Q96NK8 337 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 FBXO28Q9NVF7 368 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 CD207Q9UJ71 328 aa13.35□□□□□ -0.27
TRIM59-206ENST00000494486 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
TRIM59-206ENST00000494486 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
TRIM59-206ENST00000494486 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
TRIM59-206ENST00000494486 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
TRIM59-206ENST00000494486 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
TRIM59-206ENST00000494486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM59-206ENST00000494486 FGD4Q96M96 766 aa13.34□□□□□ -0.27
TRIM59-206ENST00000494486 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
TRIM59-206ENST00000494486 PKD1L2Q7Z442 2459 aa13.34□□□□□ -0.27
TRIM59-206ENST00000494486 SMPD1P17405 629 aa13.33□□□□□ -0.28
TRIM59-206ENST00000494486 PLCD1P51178 756 aa13.33□□□□□ -0.28
TRIM59-206ENST00000494486 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
TRIM59-206ENST00000494486 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
TRIM59-206ENST00000494486 ANKRD35Q8N283 1001 aa13.33□□□□□ -0.28
TRIM59-206ENST00000494486 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
TRIM59-206ENST00000494486 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
TRIM59-206ENST00000494486 EYA4O95677 639 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
TRIM59-206ENST00000494486 GABPAQ06546 454 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 TFCP2Q12800 502 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 IKBKEQ14164 716 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 FAM117BQ6P1L5 589 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 NFRKBQ6P4R8 1299 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
TRIM59-206ENST00000494486 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 DLL3Q9NYJ7 618 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 RIPK3Q9Y572 518 aa13.32□□□□□ -0.28
TRIM59-206ENST00000494486 CHD8Q9HCK8 2581 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 ASB14A6NK59 587 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 ATP2A1O14983 1001 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 CXCL10P02778 98 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
TRIM59-206ENST00000494486 ICAM3P32942 547 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
TRIM59-206ENST00000494486 PURAQ00577 322 aaKnown RBP13.31□□□□□ -0.28
TRIM59-206ENST00000494486 HYAL1Q12794 435 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
TRIM59-206ENST00000494486 GPNMBQ14956 572 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 ACAP1Q15027 740 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
TRIM59-206ENST00000494486 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
TRIM59-206ENST00000494486 ZFHX4Q86UP3 3567 aa13.3□□□□□ -0.28
TRIM59-206ENST00000494486 SIP14410 1827 aa13.3□□□□□ -0.28
TRIM59-206ENST00000494486 ICA1Q05084 483 aa13.3□□□□□ -0.28
TRIM59-206ENST00000494486 MTG1Q9BT17 334 aaPredicted RBP13.3□□□□□ -0.28
TRIM59-206ENST00000494486 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
TRIM59-206ENST00000494486 TBX10O75333 385 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
TRIM59-206ENST00000494486 SELPP16109 830 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 CYP7A1P22680 504 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 PTPN21Q16825 1174 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 KIAA2013Q8IYS2 634 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 LMAN2LQ9H0V9 348 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
TRIM59-206ENST00000494486 TPRP12270 2363 aaKnown RBP13.29□□□□□ -0.28
TRIM59-206ENST00000494486 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms