RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 CENPFP49454 3210 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 ABCB11O95342 1321 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 PGK2P07205 417 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 NEK4P51957 841 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 AK2P54819 239 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 NSMFQ6X4W1 530 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 NOL8Q76FK4 1167 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 FBXO11Q86XK2 927 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 ANKRD35Q8N283 1001 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 TRIB2Q92519 343 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 USP6NLQ92738 828 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 RRP36Q96EU6 259 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 AMNQ9BXJ7 453 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
RFC2-211ENST00000494019 A1CFQ9NQ94 594 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 BIN2Q9UBW5 565 aaPredicted RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
RFC2-211ENST00000494019 PFASO15067 1338 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 NFIBO00712 420 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 COBLO75128 1261 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 HMGCRP04035 888 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 XRCC5P13010 732 aaKnown RBP11.72□□□□□ -0.53
RFC2-211ENST00000494019 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 CDC27P30260 824 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 STK3Q13188 491 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 CCL14Q16627 93 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
RFC2-211ENST00000494019 ABHD8Q96I13 439 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
RFC2-211ENST00000494019 PNMA6FA0A0J9YX94 578 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 PTPDC1A2A3K4 754 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 INHAP05111 366 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 HOXC6P09630 235 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 EVCP57679 992 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 PPP2R5BQ15173 497 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 CLEC4DQ8WXI8 215 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 TBC1D32Q96NH3 1257 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 KIF2CQ99661 725 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.53
RFC2-211ENST00000494019 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 PCDHA1Q9Y5I3 950 aa11.71□□□□□ -0.53
RFC2-211ENST00000494019 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ADD1P35611 737 aaKnown RBP11.7□□□□□ -0.54
RFC2-211ENST00000494019 UBXN2AP68543 259 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 TRAF1Q13077 416 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ARMC5Q96C12 935 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ZNF274Q96GC6 653 aaPredicted RBP11.7□□□□□ -0.54
RFC2-211ENST00000494019 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 ALDH8A1Q9H2A2 487 aaPredicted RBP11.7□□□□□ -0.54
RFC2-211ENST00000494019 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
RFC2-211ENST00000494019 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 TPCN1Q9ULQ1 816 aa11.7□□□□□ -0.54
RFC2-211ENST00000494019 MRPL11Q9Y3B7 192 aaKnown RBP11.7□□□□□ -0.54
RFC2-211ENST00000494019 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
RFC2-211ENST00000494019 CALML3P27482 149 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 RPS6P62753 249 aaKnown RBP11.69□□□□□ -0.54
RFC2-211ENST00000494019 CNTN2Q02246 1040 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 FUT2Q10981 343 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 TRIM32Q13049 653 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
RFC2-211ENST00000494019 MFSD14CQ5VZR4 134 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 OLFML2BQ68BL8 750 aa11.69□□□□□ -0.54
RFC2-211ENST00000494019 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.544e-6■■■□□ 15
RFC2-211ENST00000494019 SLKQ9H2G2 1235 aaPredicted RBP11.69□□□□□ -0.54
RFC2-211ENST00000494019 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
RFC2-211ENST00000494019 MYH7BA7E2Y1 1941 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 CCDC85CA6NKD9 419 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 CPLX1O14810 134 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 LARGE1O95461 756 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 CFBP00751 764 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 CYP2C19P33261 490 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 SCRN1Q12765 414 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 RABEP1Q15276 862 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 MTFR1Q15390 333 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 HEATR3Q7Z4Q2 680 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 PHKBQ93100 1093 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms