RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 USH1GQ495M9 461 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 MAMDC4Q6UXC1 1216 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 CATIPQ7Z7H3 387 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.6
SATB1-217ENST00000493952 ANKLE1Q8NAG6 615 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 DIS3LQ8TF46 1054 aaKnown RBP18.83■□□□□ 0.6
SATB1-217ENST00000493952 CLEC4DQ8WXI8 215 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 MYL10Q9BUA6 226 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 CYP39A1Q9NYL5 469 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 PNMA2Q9UL42 364 aa18.83■□□□□ 0.6
SATB1-217ENST00000493952 ASTN1O14525 1302 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 SYNGAP1Q96PV0 1343 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 SOWAHBA6NEL2 793 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 MNX1P50219 401 aaPredicted RBP18.82■□□□□ 0.6
SATB1-217ENST00000493952 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 KCNB2Q92953 911 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 NRBP1Q9UHY1 535 aa18.82■□□□□ 0.6
SATB1-217ENST00000493952 SEPT4O43236 478 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 MSCO60682 206 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 DDAH1O94760 285 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 SNAI1O95863 264 aaPredicted RBP18.81■□□□□ 0.6
SATB1-217ENST00000493952 LIFRP42702 1097 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 KRT32Q14532 448 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 PAWRQ96IZ0 340 aaKnown RBP18.81■□□□□ 0.6
SATB1-217ENST00000493952 TCEANC2Q96MN5 208 aa18.81■□□□□ 0.6
SATB1-217ENST00000493952 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
SATB1-217ENST00000493952 CCDC69A6NI79 296 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 ZNF865P0CJ78 1059 aaPredicted RBP18.8■□□□□ 0.6
SATB1-217ENST00000493952 BAATQ14032 418 aaPredicted RBP18.8■□□□□ 0.6
SATB1-217ENST00000493952 SLC30A10Q6XR72 485 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 ARMCX2Q7L311 632 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 MTMR8Q96EF0 704 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 RIOX1Q9H6W3 641 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.8■□□□□ 0.6
SATB1-217ENST00000493952 CNPY2Q9Y2B0 182 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 SNX14Q9Y5W7 946 aa18.8■□□□□ 0.6
SATB1-217ENST00000493952 ABCB11O95342 1321 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 CYTH3O43739 400 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 EXOSC10Q01780 885 aaKnown RBP18.79■□□□□ 0.6
SATB1-217ENST00000493952 RNF207Q6ZRF8 634 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
SATB1-217ENST00000493952 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 MAP3K14Q99558 947 aa18.79■□□□□ 0.6
SATB1-217ENST00000493952 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
SATB1-217ENST00000493952 PPP1R11O60927 126 aaPredicted RBP18.78■□□□□ 0.6
SATB1-217ENST00000493952 CPA1P15085 419 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 RXRAP19793 462 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 CALML3P27482 149 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 NECAB2Q7Z6G3 386 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 SGMS1Q86VZ5 419 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
SATB1-217ENST00000493952 PIGSQ96S52 555 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
SATB1-217ENST00000493952 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
SATB1-217ENST00000493952 ZBTB5O15062 677 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.6
SATB1-217ENST00000493952 AKR1A1P14550 325 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
SATB1-217ENST00000493952 ACVR2BQ13705 512 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 LENG1Q96BZ8 264 aaPredicted RBP18.77■□□□□ 0.6
SATB1-217ENST00000493952 JAKMIP1Q96N16 626 aaKnown RBP18.77■□□□□ 0.6
SATB1-217ENST00000493952 AMNQ9BXJ7 453 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 ABHD16BQ9H3Z7 469 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 SLC12A7Q9Y666 1083 aa18.77■□□□□ 0.6
SATB1-217ENST00000493952 MYH7BA7E2Y1 1941 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 ASB14A6NK59 587 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 PLEKHA8P1O95397 391 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 HMGB1P09429 215 aaKnown RBP18.76■□□□□ 0.59
SATB1-217ENST00000493952 COL6A1P12109 1028 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 KIF5BP33176 963 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
SATB1-217ENST00000493952 MICU3Q86XE3 530 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 RGS22Q8NE09 1264 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 TBC1D5Q92609 795 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 HTATIP2Q9BUP3 242 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 C11orf49Q9H6J7 331 aa18.76■□□□□ 0.59
SATB1-217ENST00000493952 ADD3Q9UEY8 706 aaKnown RBP18.76■□□□□ 0.59
SATB1-217ENST00000493952 ADCY6O43306 1168 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 CALM1P0DP23 149 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 CALM2P0DP24 149 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 CALM3P0DP25 149 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 RARBP10826 455 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 GJC2Q5T442 439 aaPredicted RBP18.75■□□□□ 0.59
SATB1-217ENST00000493952 APOA5Q6Q788 366 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 SPZ1Q9BXG8 430 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 MRPL11Q9Y3B7 192 aaKnown RBP18.75■□□□□ 0.59
SATB1-217ENST00000493952 CEP290O15078 2479 aa18.75■□□□□ 0.59
SATB1-217ENST00000493952 DNM1LO00429 736 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms