RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
PDLIM1-205ENST00000493949 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
PDLIM1-205ENST00000493949 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
PDLIM1-205ENST00000493949 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
PDLIM1-205ENST00000493949 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
PDLIM1-205ENST00000493949 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 CIAO1O76071 339 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 LDHCP07864 332 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 TIMM10P62072 90 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 RNF20Q5VTR2 975 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 FOXP4Q8IVH2 680 aaPredicted RBP12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 ANKRD7Q92527 254 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 TSEN34Q9BSV6 310 aaKnown RBP12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 HMG20BQ9P0W2 317 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 COG5Q9UP83 839 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 PAXBP1Q9Y5B6 917 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 MYH1P12882 1939 aa12.27□□□□□ -0.45
PDLIM1-205ENST00000493949 PARP14Q460N5 1801 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 TRIOO75962 3097 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 CFAP54Q96N23 3096 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 FAM86C2PA6NEL3 165 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 APBB1O00213 710 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 COBLO75128 1261 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 GADD45BO75293 160 aaPredicted RBP12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 GDF11O95390 407 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 RARBP10826 455 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 AK2P54819 239 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 GSTO1P78417 241 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 ABRAQ8N0Z2 381 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 SHCBP1Q8NEM2 672 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 NSUN4Q96CB9 384 aaKnown RBP12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 KCNH6Q9H252 994 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 SLC5A4Q9NY91 659 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 YBX2Q9Y2T7 364 aaKnown RBP12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 USP34Q70CQ2 3546 aa12.26□□□□□ -0.45
PDLIM1-205ENST00000493949 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 KIF2AO00139 706 aaPredicted RBP12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 CTAGE5O15320 804 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 TUBB4AP04350 444 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 USP14P54578 494 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 NHLH1Q02575 133 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 IER5LQ5T953 404 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 EVI5LQ96CN4 794 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 MAML3Q96JK9 1138 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 KIAA1683Q9H0B3 1180 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 CNPY2Q9Y2B0 182 aa12.25□□□□□ -0.45
PDLIM1-205ENST00000493949 ADAMTS4O75173 837 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 CSF2RAP15509 400 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 VCAM1P19320 739 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 CDK7P50613 346 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 KRT32Q14532 448 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 MROH7Q68CQ1 1323 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 CLASRPQ8N2M8 674 aaKnown RBP12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 ZDBF2Q9HCK1 2354 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 KCND1Q9NSA2 647 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 ECHDC1Q9NTX5 307 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 MTCH2Q9Y6C9 303 aa12.24□□□□□ -0.45
PDLIM1-205ENST00000493949 SPTBN4Q9H254 2564 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 PGK1P00558 417 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 IL15P40933 162 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 ACLYP53396 1101 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 CCSAPQ6IQ19 270 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 SARM1Q6SZW1 724 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 SH3RF3Q8TEJ3 882 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 IL23AQ9NPF7 189 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 CGNQ9P2M7 1197 aaKnown RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1-205ENST00000493949 ACRP10323 421 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 ERCC3P19447 782 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 GJB2P29033 226 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 SKIV2LQ15477 1246 aaKnown RBP12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms