RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FLT3LGP49771 235 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 CLEC4DQ8WXI8 215 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 GPKOWQ92917 476 aaPredicted RBP eCLIP20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 GTF3C6Q969F1 213 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 MMP19Q99542 508 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 ACAD9Q9H845 621 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 SRRDQ9UH36 339 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 DOCK3Q8IZD9 2030 aa20.69■□□□□ 0.9
PDLIM7-208ENST00000493815 MGAMO43451 1857 aa20.68■□□□□ 0.9
PDLIM7-208ENST00000493815 IFNAR1P17181 557 aa20.68■□□□□ 0.9
PDLIM7-208ENST00000493815 ADORA2AP29274 412 aa20.68■□□□□ 0.9
PDLIM7-208ENST00000493815 COPB2P35606 906 aa20.68■□□□□ 0.9
PDLIM7-208ENST00000493815 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
PDLIM7-208ENST00000493815 CTDNEP1O95476 244 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 CYP2B6P20813 491 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 GRB14Q14449 540 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 KCTD2Q14681 263 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 ARHGEF6Q15052 776 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 TKFCQ3LXA3 575 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 MORN1Q5T089 497 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 NSMFQ6X4W1 530 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 HEATR3Q7Z4Q2 680 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 CTU1Q7Z7A3 348 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 ANKRD35Q8N283 1001 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 HOXD10P28358 340 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 TBC1D5Q92609 795 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 NUDT12Q9BQG2 462 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 A1CFQ9NQ94 594 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
PDLIM7-208ENST00000493815 ABCB11O95342 1321 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 SLC15A5A6NIM6 579 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 STRNO43815 780 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 COBLO75128 1261 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 PKN1Q16512 942 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 WWC2Q6AWC2 1192 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 DDX11Q96FC9 970 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 MYH6P13533 1939 aa20.66■□□□□ 0.9
PDLIM7-208ENST00000493815 OPLAHO14841 1288 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 PRPF3O43395 683 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 GNRH1P01148 92 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 SSRP1Q08945 709 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 MAP2K5Q13163 448 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 CPLX2Q6PUV4 134 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 USP6NLQ92738 828 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 TMX3Q96JJ7 454 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 ZSCAN31Q96LW9 406 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 PURBQ96QR8 312 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 PNMA2Q9UL42 364 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 PTCH2Q9Y6C5 1203 aa20.65■□□□□ 0.9
PDLIM7-208ENST00000493815 PTPDC1A2A3K4 754 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 JAK2O60674 1132 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 AKAP17AQ02040 695 aaKnown RBP20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 TYW1BQ6NUM6 668 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 SLC30A10Q6XR72 485 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 DPP9Q86TI2 863 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 RAET1EQ8TD07 263 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 SOCS4Q8WXH5 440 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 RNF26Q9BY78 433 aaPredicted RBP20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 CYP39A1Q9NYL5 469 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.9
PDLIM7-208ENST00000493815 PLXNB2O15031 1838 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 SCG2P13521 617 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 CNTN2Q02246 1040 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 BAATQ14032 418 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 CCL14Q16627 93 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 PFKFB3Q16875 520 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 COL13A1Q5TAT6 717 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 TRIM22Q8IYM9 498 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 ABRAQ8N0Z2 381 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 NPLOC4Q8TAT6 608 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 AIFM3Q96NN9 605 aa20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 SH2B1Q9NRF2 756 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-208ENST00000493815 CDKL5O76039 1030 aa20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 ELNP15502 786 aa20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 CALML3P27482 149 aa20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 RGS2P41220 211 aa20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 RNF207Q6ZRF8 634 aa20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-208ENST00000493815 STXBP3O00186 592 aa20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 CFBP00751 764 aa20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 HOXA13P31271 388 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 MCM2P49736 904 aa20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 RPS6P62753 249 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 DDX49Q9Y6V7 483 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-208ENST00000493815 DNAJC25-GNG10A0A024R161 153 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 IL27Q8NEV9 243 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 SHISA4Q96DD7 197 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 APBA2Q99767 749 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 BARHL2Q9NY43 387 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 FLRT1Q9NZU1 646 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 ADCY3O60266 1144 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 FDPSP14324 419 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 NAPAP54920 295 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 TRAF1Q13077 416 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 ZNF792Q3KQV3 632 aa20.61■□□□□ 0.89
PDLIM7-208ENST00000493815 MCOLN1Q9GZU1 580 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms