RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SLC14A2Q15849 920 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 LRP10Q7Z4F1 713 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
ITGB1-216ENST00000493758 JMJD8Q96S16 334 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 CYP26B1Q9NR63 512 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 C2orf71A6NGG8 1288 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 ITGAVP06756 1048 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 GTF2IRD2BQ6EKJ0 949 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 MPZL3Q6UWV2 235 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 GTF2IRD2Q86UP8 949 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 TRIM55Q9BYV6 548 aa6.8□□□□□ -1.32
ITGB1-216ENST00000493758 SRGAP3O43295 1099 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 PEX10O60683 326 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-216ENST00000493758 KCNH1O95259 989 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 SEPHS1P49903 392 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 CYP4F3Q08477 520 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 ACBD5Q5T8D3 534 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-216ENST00000493758 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
ITGB1-216ENST00000493758 CCDC140Q96MF4 163 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 MMP19Q99542 508 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 KRTAP4-12Q9BQ66 201 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 EPB41L4BQ9H329 900 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
ITGB1-216ENST00000493758 AGRPO00253 132 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 VAMP4O75379 141 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 HOXC12P31275 282 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 L1CAMP32004 1257 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 ARL4AP40617 200 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 YBX1P67809 324 aaKnown RBP6.78□□□□□ -1.32
ITGB1-216ENST00000493758 SCRN1Q12765 414 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 RASGRF1Q13972 1273 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 SV2CQ496J9 727 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 SOGA3Q5TF21 947 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 E4F1Q66K89 784 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-216ENST00000493758 PRR23BQ6ZRT6 265 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-216ENST00000493758 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 C1orf159Q96HA4 380 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 CCDC113Q9H0I3 377 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-216ENST00000493758 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
ITGB1-216ENST00000493758 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 TBX1O43435 398 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 SEMA7AO75326 666 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 TSPAN15O95858 294 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 PAMP19021 973 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 GFRA1P56159 465 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 MLANAQ16655 118 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 DPY19L1Q2PZI1 675 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 BTN2A2Q8WVV5 523 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 FAM84AQ96KN4 292 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 SLC26A8Q96RN1 970 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
ITGB1-216ENST00000493758 NSUN3Q9H649 340 aaKnown RBP6.77□□□□□ -1.33
ITGB1-216ENST00000493758 A0A1W2PQU0 124 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 ABLIM1O14639 778 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 U2SURPO15042 1029 aaKnown RBP6.76□□□□□ -1.33
ITGB1-216ENST00000493758 CPP00450 1065 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 THBDP07204 575 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 PRKCAP17252 672 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 MVKQ03426 396 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 MAP4K2Q12851 820 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 OLFML2BQ68BL8 750 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 JAMLQ86YT9 394 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 Q8N1Y9 231 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 NUP43Q8NFH3 380 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 MKL1Q969V6 931 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 DCP1AQ9NPI6 582 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-216ENST00000493758 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
ITGB1-216ENST00000493758 NPHP3-ACAD11A0A0J9YXS1 232 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 PDPK1O15530 556 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 GLDCP23378 1020 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 GTF2F1P35269 517 aaKnown RBP eCLIP6.75□□□□□ -1.33
ITGB1-216ENST00000493758 PPP2R2AP63151 447 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 CYP4F8P98187 520 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 TMEM62Q0P6H9 643 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 KCNAB2Q13303 367 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 RASA3Q14644 834 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 CBX2Q14781 532 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-216ENST00000493758 SLC35F1Q5T1Q4 408 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 IQCEQ6IPM2 695 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 LRRC47Q8N1G4 583 aaKnown RBP6.75□□□□□ -1.33
ITGB1-216ENST00000493758 FRS2Q8WU20 508 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 ST7Q9NRC1 585 aa6.75□□□□□ -1.33
ITGB1-216ENST00000493758 FGFR1P11362 822 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 PLS3P13797 630 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 KREMEN2Q8NCW0 462 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 LGR4Q9BXB1 951 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 LRP2BPQ9P2M1 347 aa6.74□□□□□ -1.33
ITGB1-216ENST00000493758 NPFFR2Q9Y5X5 522 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms