RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 MFSD5Q6N075 450 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 MYLIPQ8WY64 445 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 HELLSQ9NRZ9 838 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 SCN5AQ14524 2016 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 ASTN1O14525 1302 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 CTAGE5O15320 804 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 ORC4O43929 436 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 PDE1AP54750 535 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 NKX3-2P78367 333 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 BEX3Q00994 111 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 TLK2Q86UE8 772 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 MAFAQ8NHW3 353 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 FAM227BQ96M60 508 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■□□□□ 9.8
NUDCD3-210ENST00000493613 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
NUDCD3-210ENST00000493613 TRANK1O15050 2925 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 A0A0D9SFI3 127 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 FGAP02671 866 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 ICAM1P05362 532 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 FGRP09769 529 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 FOSL2P15408 326 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 DNAJB2P25686 324 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 NOVP48745 357 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 PPIGQ13427 754 aaKnown RBP eCLIP12.12□□□□□ -0.477e-6■□□□□ 9.9
NUDCD3-210ENST00000493613 ALX1Q15699 326 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 CXCL17Q6UXB2 119 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 FAM126BQ8IXS8 530 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 COL25A1Q9BXS0 654 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 AP5M1Q9H0R1 490 aa12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 GNEQ9Y223 722 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-210ENST00000493613 ZMYM6O95789 1325 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 CSF2RAP15509 400 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 SMPD1P17405 629 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 SLC16A2P36021 539 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 FSCN1Q16658 493 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 CHD7Q9P2D1 2997 aa12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-210ENST00000493613 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 SCN10AQ9Y5Y9 1956 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 CABYRO75952 493 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 CD4P01730 458 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 HSPD1P10809 573 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 PTGS1P23219 599 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 ITGA7Q13683 1181 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 IQSEC1Q6DN90 963 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 BTNL9Q6UXG8 535 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 C16orf59Q7L2K0 433 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 TICAM2Q86XR7 235 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 SLC43A3Q8NBI5 491 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 LNPKQ9C0E8 428 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 TCP11L1Q9NUJ3 509 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
NUDCD3-210ENST00000493613 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 NFIBO00712 420 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 ZEB2O60315 1214 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 ACRP10323 421 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 CYP2C18P33260 490 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 ALDH5A1P51649 535 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 HAND2P61296 217 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 GRIN2CQ14957 1233 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 TMEM63BQ5T3F8 832 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms