RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 LIG3P49916 1009 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 SIK1P57059 783 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 GLIS3Q8NEA6 775 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 SECISBP2LQ93073 1101 aaKnown RBP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 ZSCAN5CA6NGD5 496 aaPredicted RBP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 GUCY2FP51841 1108 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 SH2D3CQ8N5H7 860 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACUL1-206ENST00000493518 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
CACUL1-206ENST00000493518 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 ATRNO75882 1429 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 EIF3CLB5ME19 914 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 CALM1P0DP23 149 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 CALM2P0DP24 149 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 CALM3P0DP25 149 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 KIF5BP33176 963 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 TRAPPC11Q7Z392 1133 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 CACNA2D4Q7Z3S7 1137 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 FAM71BQ8TC56 605 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 EIF3CQ99613 913 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 GOLGA6CA6NDK9 693 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 GOLGA6BA6NDN3 693 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 SYF2O95926 243 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 GOLGA6DP0CG33 693 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 KRT83P78385 493 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 RASSF7Q02833 373 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 NSUN4Q96CB9 384 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 GOLGA6AQ9NYA3 693 aa17.39■□□□□ 0.37
CACUL1-206ENST00000493518 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 FRMPD2Q68DX3 1309 aaPredicted RBP17.39■□□□□ 0.37
CACUL1-206ENST00000493518 CDK5RAP3Q96JB5 506 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 RUFY1Q96T51 708 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 HPCAL4Q9UM19 191 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
CACUL1-206ENST00000493518 EIF4A3P38919 411 aaKnown RBP17.38■□□□□ 0.37
CACUL1-206ENST00000493518 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 GOLPH3Q9H4A6 298 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 GFPT1Q06210 699 aaPredicted RBP17.38■□□□□ 0.37
CACUL1-206ENST00000493518 ELOA2Q8IYF1 753 aaPredicted RBP17.38■□□□□ 0.37
CACUL1-206ENST00000493518 HNRNPLLQ8WVV9 542 aaKnown RBP17.38■□□□□ 0.37
CACUL1-206ENST00000493518 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
CACUL1-206ENST00000493518 TRPM3Q9HCF6 1732 aaPredicted RBP17.37■□□□□ 0.37
CACUL1-206ENST00000493518 POTEMA6NI47 508 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 NTSR2O95665 410 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 GRIK5Q16478 980 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 IL17RBQ9NRM6 502 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 PCDHA6Q9UN73 950 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 PCDHA8Q9Y5H6 950 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 ZNF263O14978 683 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 CYTH3O43739 400 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 RCSD1Q6JBY9 416 aa17.37■□□□□ 0.37
CACUL1-206ENST00000493518 SH3RF3Q8TEJ3 882 aaPredicted RBP17.37■□□□□ 0.37
CACUL1-206ENST00000493518 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 DDAH1O94760 285 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 LONP1P36776 959 aaKnown RBP17.36■□□□□ 0.37
CACUL1-206ENST00000493518 DNM2P50570 870 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 MAP9Q49MG5 647 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 P2RX5Q93086 422 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 CCDC47Q96A33 483 aaKnown RBP17.36■□□□□ 0.37
CACUL1-206ENST00000493518 DUSP9Q99956 384 aaKnown RBP17.36■□□□□ 0.37
CACUL1-206ENST00000493518 MYH10P35580 1976 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 SMCO2A6NFE2 343 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 FTCDO95954 541 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 IVLP07476 585 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 CALML3P27482 149 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 CCDC70Q6NSX1 233 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 FAM76AQ8TAV0 307 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 COA7Q96BR5 231 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 CAPN11Q9UMQ6 739 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 ITIH6Q6UXX5 1313 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
CACUL1-206ENST00000493518 SEMA3EO15041 775 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 TRIM14Q14142 442 aa17.36■□□□□ 0.37
CACUL1-206ENST00000493518 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
CACUL1-206ENST00000493518 LRRC10BA6NIK2 292 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 DDB1Q16531 1140 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 TTI2Q6NXR4 508 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 SLURP2P0DP57 97 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 MAGEA1P43355 309 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 PDE4CQ08493 712 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 BCAS4Q8TDM0 211 aa17.35■□□□□ 0.37
CACUL1-206ENST00000493518 MYH7P12883 1935 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms