RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 ZBTB5O15062 677 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 RXRAP19793 462 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 NEK4P51957 841 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 IRF5Q13568 498 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 GRB14Q14449 540 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 RAB11FIP4Q86YS3 637 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 REPS2Q8NFH8 660 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 PIBF1Q8WXW3 757 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 HPS5Q9UPZ3 1129 aa9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 RBBP6Q7Z6E9 1792 aaKnown RBP9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 ST18O60284 1047 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 CDKL5O76039 1030 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 SEC24BO95487 1268 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 HMGCRP04035 888 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 XRCC5P13010 732 aaKnown RBP9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 SMARCA1P28370 1054 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 CTGFP29279 349 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 QRICH1Q2TAL8 776 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 MORN1Q5T089 497 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 CUL5Q93034 780 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 ABHD8Q96I13 439 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 SPZ1Q9BXG8 430 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 CPVLQ9H3G5 476 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 JMJD4Q9H9V9 463 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 ADD3Q9UEY8 706 aaKnown RBP9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 PCDHA1Q9Y5I3 950 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 SMCHD1A6NHR9 2005 aa9.41□□□□□ -0.9
TM4SF1-204ENST00000493348 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 MYCP01106 439 aaPredicted RBP9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 PGK2P07205 417 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 ELNP15502 786 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 CALML3P27482 149 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 CNGA1P29973 690 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 STK3Q13188 491 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 RNF207Q6ZRF8 634 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 NOL8Q76FK4 1167 aaKnown RBP9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 FBXL16Q8N461 479 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 PIGSQ96S52 555 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 CNPY2Q9Y2B0 182 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 RIPK3Q9Y572 518 aa9.4□□□□□ -0.9
TM4SF1-204ENST00000493348 ZNF536O15090 1300 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 ASB14A6NK59 587 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 CFBP00751 764 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 INHAP05111 366 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 RABEP1Q15276 862 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 HEATR3Q7Z4Q2 680 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 CCDC12Q8WUD4 166 aaPredicted RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 MAF1Q9H063 256 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 ALDH8A1Q9H2A2 487 aaPredicted RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 GJD2Q9UKL4 321 aa9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 DIS3Q9Y2L1 958 aaKnown RBP9.39□□□□□ -0.91
TM4SF1-204ENST00000493348 MCM3APO60318 1980 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 GCOM1H8Y6P7 765 aaPredicted RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 HOXC6P09630 235 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 XBP1P17861 261 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 PDIA3P30101 505 aaKnown RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 AK2P54819 239 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 NAPAP54920 295 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 MUM1L1Q5H9M0 696 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 OLFML2BQ68BL8 750 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 MSL3Q8N5Y2 521 aaKnown RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 SAMD3Q8N6K7 520 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 MAML3Q96JK9 1138 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 AGXT2Q9BYV1 514 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 BACH2Q9BYV9 841 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 GLT8D2Q9H1C3 349 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 A1CFQ9NQ94 594 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms