RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 KCTD1Q719H9 257 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 PAK6Q9NQU5 681 aaPredicted RBP15.57■□□□□ 0.08
MSH6-208ENST00000493177 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
MSH6-208ENST00000493177 VWA5AO00534 786 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 FCER1AP12319 257 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 CNGA1P29973 690 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 CDC27P30260 824 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 COPB2P35606 906 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 ADD1P35611 737 aaKnown RBP15.56■□□□□ 0.08
MSH6-208ENST00000493177 STAT3P40763 770 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 KCTD2Q14681 263 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 TMEM132BQ14DG7 1078 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 ASPRV1Q53RT3 343 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 CPXCR1Q8N123 301 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
MSH6-208ENST00000493177 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 USP6NLQ92738 828 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 MMP19Q99542 508 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 MAD2L2Q9UI95 211 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
MSH6-208ENST00000493177 NID2Q14112 1375 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
MSH6-208ENST00000493177 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 SNHG28P0DPA3 235 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 CACNB2Q08289 660 aaPredicted RBP15.55■□□□□ 0.08
MSH6-208ENST00000493177 GPATCH4Q5T3I0 446 aaKnown RBP15.55■□□□□ 0.08
MSH6-208ENST00000493177 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
MSH6-208ENST00000493177 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
MSH6-208ENST00000493177 STAG2Q8N3U4 1231 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 CCDC82Q8N4S0 544 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 NPLOC4Q8TAT6 608 aa15.55■□□□□ 0.08
MSH6-208ENST00000493177 TMEM232C9JQI7 657 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 PPFIA3O75145 1194 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 CDKL5O76039 1030 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 CCND3P30281 292 aaPredicted RBP15.54■□□□□ 0.08
MSH6-208ENST00000493177 STAT2P52630 851 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 ST3GAL1Q11201 340 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 TMTC3Q6ZXV5 915 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 RIOX2Q8IUF8 465 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 LZTS2Q9BRK4 669 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 TEX13BQ9BXU2 312 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 UBA5Q9GZZ9 404 aa15.54■□□□□ 0.08
MSH6-208ENST00000493177 FAM217BQ9NTX9 383 aaPredicted RBP15.54■□□□□ 0.08
MSH6-208ENST00000493177 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.54■□□□□ 0.08
MSH6-208ENST00000493177 HTTP42858 3142 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 PDE4DIPQ5VU43 2346 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 DTNBO60941 627 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 SLC16A2P36021 539 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
MSH6-208ENST00000493177 CUL4AQ13619 759 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 NECAB2Q7Z6G3 386 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 FAM160B2Q86V87 743 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 ANKLE1Q8NAG6 615 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 CHURC1Q8WUH1 139 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 SLC26A6Q9BXS9 759 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 CPVLQ9H3G5 476 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 FLRT1Q9NZU1 646 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 ADAMTS5Q9UNA0 930 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 SMC3Q9UQE7 1217 aa15.53■□□□□ 0.08
MSH6-208ENST00000493177 PTPDC1A2A3K4 754 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 HOXC6P09630 235 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 CYP2C19P33261 490 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 MAP3K21Q5TCX8 1036 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 SRBD1Q8N5C6 995 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 NSUN7Q8NE18 718 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 PHKBQ93100 1093 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 DDX11Q96FC9 970 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 PAWRQ96IZ0 340 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 LLPHQ9BRT6 129 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 CRISPLD2Q9H0B8 497 aa15.52■□□□□ 0.08
MSH6-208ENST00000493177 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 ZNF214Q9UL59 606 aaPredicted RBP15.52■□□□□ 0.08
MSH6-208ENST00000493177 JAK2O60674 1132 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 CTDNEP1O95476 244 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 FDX1P10109 184 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 IFNAR1P17181 557 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 SYDE2Q5VT97 1194 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 OLFML2BQ68BL8 750 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
MSH6-208ENST00000493177 IPO9Q96P70 1041 aaKnown RBP15.51■□□□□ 0.07
MSH6-208ENST00000493177 CNTNAP5Q8WYK1 1306 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 EVI5O60447 810 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 MSCO60682 206 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 COBLO75128 1261 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
MSH6-208ENST00000493177 PGK2P07205 417 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 HMGN5P82970 282 aaKnown RBP15.5■□□□□ 0.07
MSH6-208ENST00000493177 NTRK3Q16288 839 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 HOMER1Q86YM7 354 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 ADGRF4Q8IZF3 695 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms