RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 DIS3Q9Y2L1 958 aaKnown RBP14.86□□□□□ -0.03
CLIP2-209ENST00000493166 CYP46A1Q9Y6A2 500 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 DNAJC25-GNG10A0A024R161 153 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 KLF18A0A0U1RQI7 1052 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 TNRC18O15417 2968 aaPredicted RBP14.85□□□□□ -0.03
CLIP2-209ENST00000493166 ZBTB43O43298 467 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 SEC24BO95487 1268 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 ZNF792Q3KQV3 632 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 RUFY3Q7L099 469 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 FBXO11Q86XK2 927 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 TM6SF1Q9BZW5 370 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 RIOX1Q9H6W3 641 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 HMX1Q9NP08 348 aaPredicted RBP14.85□□□□□ -0.03
CLIP2-209ENST00000493166 MKI67P46013 3256 aaKnown RBP14.85□□□□□ -0.03
CLIP2-209ENST00000493166 ABCB11O95342 1321 aa14.85□□□□□ -0.03
CLIP2-209ENST00000493166 POTEFA5A3E0 1075 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 POTEB2H3BUK9 544 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 NFIBO00712 420 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 ZBTB5O15062 677 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 CYTH3O43739 400 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 CYP2C19P33261 490 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 ANAPC15P60006 121 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 CACNB2Q08289 660 aaPredicted RBP14.84□□□□□ -0.03
CLIP2-209ENST00000493166 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 MAP3K21Q5TCX8 1036 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 FANCBQ8NB91 859 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 BRF1Q92994 677 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 MTMR8Q96EF0 704 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 AMNQ9BXJ7 453 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 UPF3BQ9BZI7 483 aaKnown RBP14.84□□□□□ -0.03
CLIP2-209ENST00000493166 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLIP2-209ENST00000493166 CYP39A1Q9NYL5 469 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 BRPF3Q9ULD4 1205 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
CLIP2-209ENST00000493166 PTPDC1A2A3K4 754 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 GOLGA8AA7E2F4 631 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 GOLGA8BA8MQT2 603 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 PLEKHA8P1O95397 391 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 RTN1Q16799 776 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 SLC35G1Q2M3R5 365 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 CLEC4DQ8WXI8 215 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 PIBF1Q8WXW3 757 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 PIGSQ96S52 555 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 TINF2Q9BSI4 451 aa14.83□□□□□ -0.04
CLIP2-209ENST00000493166 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
CLIP2-209ENST00000493166 GJB1P08034 283 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 SMARCA1P28370 1054 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 RCAN1P53805 252 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 TRAF1Q13077 416 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 BAATQ14032 418 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 RNF207Q6ZRF8 634 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 CMTR1Q8N1G2 835 aaKnown RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 SRBD1Q8N5C6 995 aaKnown RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 FAM133AQ8N9E0 248 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 DEFB118Q96PH6 123 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 AGXT2Q9BYV1 514 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 PAK6Q9NQU5 681 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 SEC63Q9UGP8 760 aaKnown RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 MRPL11Q9Y3B7 192 aaKnown RBP14.82□□□□□ -0.04
CLIP2-209ENST00000493166 KIAA1217Q5T5P2 1943 aa14.82□□□□□ -0.04
CLIP2-209ENST00000493166 DNAH12Q6ZR08 3092 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 PNMA6FA0A0J9YX94 578 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-209ENST00000493166 IGHA2P01877 340 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-209ENST00000493166 CALML3P27482 149 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 CNGA1P29973 690 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 CCND3P30281 292 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-209ENST00000493166 GJA8P48165 433 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLIP2-209ENST00000493166 SLC30A10Q6XR72 485 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 MSL3Q8N5Y2 521 aaKnown RBP14.81□□□□□ -0.04
CLIP2-209ENST00000493166 FGD4Q96M96 766 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 PDRG1Q9NUG6 133 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 PCDHA1Q9Y5I3 950 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 SYNGAP1Q96PV0 1343 aa14.81□□□□□ -0.04
CLIP2-209ENST00000493166 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 CYBAP13498 195 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 RPS6P62753 249 aaKnown RBP14.8□□□□□ -0.04
CLIP2-209ENST00000493166 MAMDC4Q6UXC1 1216 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 MCF2L2Q86YR7 1114 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 U2AF1L4Q8WU68 220 aaKnown RBP14.8□□□□□ -0.04
CLIP2-209ENST00000493166 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 NID2Q14112 1375 aa14.8□□□□□ -0.04
CLIP2-209ENST00000493166 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
CLIP2-209ENST00000493166 SGPL1O95470 568 aa14.79□□□□□ -0.04
CLIP2-209ENST00000493166 TOB2Q14106 344 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms