RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 NOVP48745 357 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 KCNJ12Q14500 433 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 TCP11X2Q5H9J9 407 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 TTBK2Q6IQ55 1244 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 KRT25Q7Z3Z0 450 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
PRAME-213ENST00000492657 ZFPM1Q8IX07 1006 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 CCSER1Q9C0I3 900 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 RMND1Q9NWS8 449 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 PHLPP2Q6ZVD8 1323 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 ADSSL1Q8N142 457 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 CTAGE1Q96RT6 745 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 KBTBD4Q9NVX7 518 aa14.47□□□□□ -0.09
PRAME-213ENST00000492657 EDIL3O43854 480 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 GNA11P29992 359 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 CACNB3P54284 484 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 NFIAQ12857 509 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 PANX2Q96RD6 677 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 RIOX1Q9H6W3 641 aa14.46□□□□□ -0.09
PRAME-213ENST00000492657 LRRC10BA6NIK2 292 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 MFAP3LO75121 409 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 SLC16A2P36021 539 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 TXKP42681 527 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 SHROOM1Q2M3G4 852 aaPredicted RBP14.46□□□□□ -0.1
PRAME-213ENST00000492657 CDC42EP5Q6NZY7 148 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.1
PRAME-213ENST00000492657 NEK11Q8NG66 645 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 CCDC12Q8WUD4 166 aaPredicted RBP14.46□□□□□ -0.1
PRAME-213ENST00000492657 HPS3Q969F9 1004 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 MMTAG2Q9BU76 263 aaKnown RBP14.46□□□□□ -0.1
PRAME-213ENST00000492657 LZTFL1Q9NQ48 299 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 PARP3Q9Y6F1 533 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 ANKRD31Q8N7Z5 1873 aa14.46□□□□□ -0.1
PRAME-213ENST00000492657 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 MSL1Q68DK7 614 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 CARD6Q9BX69 1037 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 LTBP1Q14766 1721 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 BRWD3Q6RI45 1802 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 SHMT1P34896 483 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 PRPHP41219 470 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 UIMC1Q96RL1 719 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 DBNDD1Q9H9R9 158 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 SERPINB13Q9UIV8 391 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 ADGRG1Q9Y653 693 aa14.45□□□□□ -0.1
PRAME-213ENST00000492657 IGKV6D-41A0A0C4DH26 115 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 MPHOSPH10O00566 681 aaKnown RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 SEC31AO94979 1220 aaKnown RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 TDP2O95551 362 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 ABL1P00519 1130 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 UBE2SQ16763 222 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 GJA10Q969M2 543 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 SRRTQ9BXP5 876 aaKnown RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 ZCCHC17Q9NP64 241 aaKnown RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 LAD1O00515 517 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 SLC37A4O43826 429 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 TUBB4AP04350 444 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 UBXN1Q04323 297 aa14.44□□□□□ -0.1
PRAME-213ENST00000492657 APOBEC3HQ6NTF7 200 aaKnown RBP14.44□□□□□ -0.1
PRAME-213ENST00000492657 G3V3G9 751 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 PES1O00541 588 aaKnown RBP14.43□□□□□ -0.1
PRAME-213ENST00000492657 FCER1AP12319 257 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 CASQ1P31415 396 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 ERVK-24P63145 666 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 STK4Q13043 487 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 KCTD1Q719H9 257 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 JMJD4Q9H9V9 463 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 H7C1D1 291 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 RAD21O60216 631 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 RHOBTB3O94955 611 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 MMP10P09238 476 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 SMARCA1P28370 1054 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 GYS2P54840 703 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 TCP10Q12799 353 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 KCNB1Q14721 858 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 GIMAP8Q8ND71 665 aaPredicted RBP14.43□□□□□ -0.1
PRAME-213ENST00000492657 ACRBPQ8NEB7 543 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 MNS1Q8NEH6 495 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 ZNF622Q969S3 477 aaKnown RBP eCLIP14.43□□□□□ -0.13e-23■□□□□ 9.4
PRAME-213ENST00000492657 TRIM9Q9C026 710 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 FOCADQ5VW36 1801 aa14.43□□□□□ -0.1
PRAME-213ENST00000492657 NKRFO15226 690 aaKnown RBP eCLIP14.42□□□□□ -0.1
PRAME-213ENST00000492657 CCDC175P0C221 793 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 NPR1P16066 1061 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 ADCY7P51828 1080 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 HNRNPH2P55795 449 aaKnown RBP14.42□□□□□ -0.1
PRAME-213ENST00000492657 ASIC1P78348 528 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 PDE4DQ08499 809 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 UBXN4Q92575 508 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
PRAME-213ENST00000492657 NUP88Q99567 741 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms