RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TDRD10Q5VZ19 366 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 NSMFQ6X4W1 530 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 UBE2R2Q712K3 238 aaPredicted RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 ZNF417Q8TAU3 575 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 ZNF587Q96SQ5 575 aaPredicted RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 SYT17Q9BSW7 474 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 OVOS2A0A0J9YW53 1432 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 OVOS2Q6IE36 1432 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 GFRA2O00451 464 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 PIK3R2O00459 728 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 AOC2O75106 756 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 AMPD3Q01432 767 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 CYFIP1Q7L576 1253 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 SMC1BQ8NDV3 1235 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 LEO1Q8WVC0 666 aaPredicted RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 NDOR1Q9UHB4 597 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 EIF3AQ14152 1382 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 HSPA1AP0DMV8 641 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 HSPA1BP0DMV9 641 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 PABPC4Q13310 644 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNX13-209ENST00000492626 EXOSC6Q5RKV6 272 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 MSL1Q68DK7 614 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNX13-209ENST00000492626 USP7Q93009 1102 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 MRPL4Q9BYD3 311 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 GEMIN8Q9NWZ8 242 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 GMPR2Q9P2T1 348 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 SUCOQ9UBS9 1254 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 ZNF214Q9UL59 606 aaPredicted RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 HIF3AQ9Y2N7 669 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 KANK1Q14678 1352 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 RGS13O14921 159 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 EFCAB14O75071 495 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 PMLP29590 882 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 CDK8P49336 464 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 USP11P51784 963 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 FCHSD1Q86WN1 690 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 C12orf50Q8NA57 414 aaPredicted RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 RNF214Q8ND24 703 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 CYB5D2Q8WUJ1 264 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 NANOS1Q8WY41 292 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 ABHD8Q96I13 439 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 MAGEB10Q96LZ2 347 aaPredicted RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNX13-209ENST00000492626 MAPRE3Q9UPY8 281 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 TNS3Q68CZ2 1445 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 B4E1Z4 1266 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 VIL1P09327 827 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 ZYXQ15942 572 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 DALRD3Q5D0E6 543 aaKnown RBP3.98□□□□□ -1.77
SNX13-209ENST00000492626 SLFN12Q8IYM2 578 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 FGD4Q96M96 766 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 HAUS7Q99871 368 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 DSCC1Q9BVC3 393 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 RNF208Q9H0X6 261 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 RRAGCQ9HB90 399 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 USP54Q70EL1 1684 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 IFT172Q9UG01 1749 aa3.98□□□□□ -1.77
SNX13-209ENST00000492626 LOC100289279A0A1B0GTE1 492 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 C2CD2LO14523 706 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 ALBP02768 609 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 CT47B1P0C2W7 299 aaPredicted RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 L1CAMP32004 1257 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 STAT3P40763 770 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 ETV3P41162 512 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 NBPF9Q3BBW0 867 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 ZC3H12AQ5D1E8 599 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 MRM1Q6IN84 353 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 DMRTC2Q8IXT2 367 aaPredicted RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 RIN3Q8TB24 985 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 MRPS23Q9Y3D9 190 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 ITSN1Q15811 1721 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 PRODHO43272 600 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 RFPL3O75679 317 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 CYP7A1P22680 504 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 AFF1P51825 1210 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 FMNL3Q8IVF7 1028 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 MCATQ8IVS2 390 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 AFAP1Q8N556 730 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 UBR7Q8N806 425 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 XAGE3Q8WTP9 111 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 KCTD13Q8WZ19 329 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 WHRNQ9P202 907 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 AKT3Q9Y243 479 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 LTBP3Q9NS15 1303 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 DNAJC25-GNG10A0A024R161 153 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 PRC1O43663 620 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 EPHX1P07099 455 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 POLR2BP30876 1174 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 ACAD11Q709F0 780 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 DDX42Q86XP3 938 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNX13-209ENST00000492626 GIMAP7Q8NHV1 300 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 EDARADDQ8WWZ3 215 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 ACSF2Q96CM8 615 aaPredicted RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 WDR18Q9BV38 432 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 NCOA5Q9HCD5 579 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 INTS7Q9NVH2 962 aaKnown RBP3.97□□□□□ -1.77
SNX13-209ENST00000492626 INSRP06213 1382 aa3.97□□□□□ -1.77
SNX13-209ENST00000492626 A0A1W2PPC1 479 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms