RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 ARHGAP39Q9C0H5 1083 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 ACAD9Q9H845 621 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 ABCB11O95342 1321 aa16.34■□□□□ 0.21
MMP11-212ENST00000492464 NTRK3Q16288 839 aa16.33■□□□□ 0.2
MMP11-212ENST00000492464 PHKBQ93100 1093 aa16.33■□□□□ 0.2
MMP11-212ENST00000492464 MMP19Q99542 508 aa16.33■□□□□ 0.2
MMP11-212ENST00000492464 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
MMP11-212ENST00000492464 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
MMP11-212ENST00000492464 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
MMP11-212ENST00000492464 KIAA1217Q5T5P2 1943 aa16.33■□□□□ 0.2
MMP11-212ENST00000492464 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 MYH7BA7E2Y1 1941 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 STRNO43815 780 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
MMP11-212ENST00000492464 FCER1AP12319 257 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 TAL1P17542 331 aaPredicted RBP16.32■□□□□ 0.2
MMP11-212ENST00000492464 CTGFP29279 349 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
MMP11-212ENST00000492464 KCTD2Q14681 263 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 SOCS4Q8WXH5 440 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 MRPL11Q9Y3B7 192 aaKnown RBP16.32■□□□□ 0.2
MMP11-212ENST00000492464 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 PCDHA1Q9Y5I3 950 aa16.32■□□□□ 0.2
MMP11-212ENST00000492464 PFASO15067 1338 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
MMP11-212ENST00000492464 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
MMP11-212ENST00000492464 PTPREP23469 700 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 NUDT12Q9BQG2 462 aa16.31■□□□□ 0.2
MMP11-212ENST00000492464 hCG_1984214I3L0E3 225 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 SCG2P13521 617 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 CAP1Q01518 475 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 GRB14Q14449 540 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
MMP11-212ENST00000492464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
MMP11-212ENST00000492464 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 CTU1Q7Z7A3 348 aaKnown RBP16.3■□□□□ 0.2
MMP11-212ENST00000492464 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 ZNF713Q8N859 430 aaPredicted RBP16.3■□□□□ 0.2
MMP11-212ENST00000492464 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.2
MMP11-212ENST00000492464 TMX3Q96JJ7 454 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 LRRC37A2A6NM11 1700 aa16.3■□□□□ 0.2
MMP11-212ENST00000492464 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 NFIBO00712 420 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 DEXIO95424 95 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 ADORA2AP29274 412 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 RGS2P41220 211 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 PRMT2P55345 433 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 PRKCZQ05513 592 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 MORN1Q5T089 497 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 NSMFQ6X4W1 530 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 CLEC4DQ8WXI8 215 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
MMP11-212ENST00000492464 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
MMP11-212ENST00000492464 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
MMP11-212ENST00000492464 PTPDC1A2A3K4 754 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 FLT3LGP49771 235 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 NAPAP54920 295 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 PPP1R18Q6NYC8 613 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 RNF207Q6ZRF8 634 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
MMP11-212ENST00000492464 CCDC12Q8WUD4 166 aaPredicted RBP16.28■□□□□ 0.2
MMP11-212ENST00000492464 WASF1Q92558 559 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 SNX21Q969T3 373 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 MAF1Q9H063 256 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
MMP11-212ENST00000492464 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
MMP11-212ENST00000492464 GABRQQ9UN88 632 aa16.28■□□□□ 0.2
MMP11-212ENST00000492464 PKN1Q16512 942 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 RGS22Q8NE09 1264 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 RAET1EQ8TD07 263 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 CUL5Q93034 780 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 APBA2Q99767 749 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 GJD2Q9UKL4 321 aa16.27■□□□□ 0.2
MMP11-212ENST00000492464 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
MMP11-212ENST00000492464 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
MMP11-212ENST00000492464 STXBP3O00186 592 aa16.26■□□□□ 0.19
MMP11-212ENST00000492464 CFBP00751 764 aa16.26■□□□□ 0.19
MMP11-212ENST00000492464 PGK2P07205 417 aa16.26■□□□□ 0.19
MMP11-212ENST00000492464 CALML3P27482 149 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms