RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 RAB11FIP4Q86YS3 637 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 FAM133AQ8N9E0 248 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 NUP133Q8WUM0 1156 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 JAKMIP1Q96N16 626 aaKnown RBP20.65■□□□□ 0.9
LMNB1-206ENST00000492190 TINF2Q9BSI4 451 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 CRISPLD2Q9H0B8 497 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 ALPK3Q96L96 1907 aa20.65■□□□□ 0.9
LMNB1-206ENST00000492190 ASTN1O14525 1302 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 DDAH1O94760 285 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 RXRAP19793 462 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 USH1GQ495M9 461 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 SGMS1Q86VZ5 419 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 RIOX1Q9H6W3 641 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 CYP39A1Q9NYL5 469 aa20.64■□□□□ 0.89
LMNB1-206ENST00000492190 SOWAHBA6NEL2 793 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 DHX16O60231 1041 aaKnown RBP20.63■□□□□ 0.89
LMNB1-206ENST00000492190 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
LMNB1-206ENST00000492190 MLLT1Q03111 559 aaPredicted RBP20.63■□□□□ 0.89
LMNB1-206ENST00000492190 LHX8Q68G74 356 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 NSMFQ6X4W1 530 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 NFXL1Q6ZNB6 911 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 PURBQ96QR8 312 aaKnown RBP20.63■□□□□ 0.89
LMNB1-206ENST00000492190 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
LMNB1-206ENST00000492190 PFASO15067 1338 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 CCDC69A6NI79 296 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 POTEB2H3BUK9 544 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 SNAI1O95863 264 aaPredicted RBP20.62■□□□□ 0.89
LMNB1-206ENST00000492190 MAMDC4Q6UXC1 1216 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 UBE2Q1Q7Z7E8 422 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 PIGSQ96S52 555 aa20.62■□□□□ 0.89
LMNB1-206ENST00000492190 DDX49Q9Y6V7 483 aaKnown RBP20.62■□□□□ 0.89
LMNB1-206ENST00000492190 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
LMNB1-206ENST00000492190 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
LMNB1-206ENST00000492190 MNX1P50219 401 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-206ENST00000492190 BAATQ14032 418 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-206ENST00000492190 ZNF467Q7Z7K2 595 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-206ENST00000492190 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
LMNB1-206ENST00000492190 TBC1D5Q92609 795 aa20.61■□□□□ 0.89
LMNB1-206ENST00000492190 ZBTB5O15062 677 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 SEC24BO95487 1268 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 HMGB1P09429 215 aaKnown RBP20.6■□□□□ 0.89
LMNB1-206ENST00000492190 ZNF865P0CJ78 1059 aaPredicted RBP20.6■□□□□ 0.89
LMNB1-206ENST00000492190 APOA5Q6Q788 366 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 SLC30A10Q6XR72 485 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 FBXO11Q86XK2 927 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 OGDHLQ9ULD0 1010 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 SLC12A7Q9Y666 1083 aa20.6■□□□□ 0.89
LMNB1-206ENST00000492190 ABCB11O95342 1321 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 SYNGAP1Q96PV0 1343 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 OPLAHO14841 1288 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 RPS6KB1P23443 525 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 CNGA1P29973 690 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 BLOC1S2Q6QNY1 142 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 Q6ZUG5 572 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 HOMER1Q86YM7 354 aa20.59■□□□□ 0.89
LMNB1-206ENST00000492190 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 SRBD1Q8N5C6 995 aaKnown RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 CTCFLQ8NI51 663 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 DDX20Q9UHI6 824 aaKnown RBP20.59■□□□□ 0.89
LMNB1-206ENST00000492190 PTPDC1A2A3K4 754 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 RPS6P62753 249 aaKnown RBP20.58■□□□□ 0.89
LMNB1-206ENST00000492190 ANO1Q5XXA6 986 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 RNF207Q6ZRF8 634 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 ARMCX2Q7L311 632 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 MICU3Q86XE3 530 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 FANCBQ8NB91 859 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 DIS3LQ8TF46 1054 aaKnown RBP20.58■□□□□ 0.89
LMNB1-206ENST00000492190 SPZ1Q9BXG8 430 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 KATNBL1Q9H079 304 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.58■□□□□ 0.89
LMNB1-206ENST00000492190 NRBP1Q9UHY1 535 aa20.58■□□□□ 0.89
LMNB1-206ENST00000492190 KIAA1217Q5T5P2 1943 aa20.58■□□□□ 0.88
LMNB1-206ENST00000492190 SEPT4O43236 478 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 FARP2O94887 1054 aaPredicted RBP20.57■□□□□ 0.88
LMNB1-206ENST00000492190 CALM1P0DP23 149 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 CALM2P0DP24 149 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 CALM3P0DP25 149 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 KIF5BP33176 963 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 APOBRQ0VD83 1088 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 RGS22Q8NE09 1264 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 AMNQ9BXJ7 453 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 AGXT2Q9BYV1 514 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 ZSWIM6Q9HCJ5 1215 aa20.57■□□□□ 0.88
LMNB1-206ENST00000492190 PNMA6FA0A0J9YX94 578 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 KLF18A0A0U1RQI7 1052 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 CALML3P27482 149 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 PSMA5P28066 241 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 SMARCA1P28370 1054 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 TMTC3Q6ZXV5 915 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 FBXL16Q8N461 479 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 BRF1Q92994 677 aa20.56■□□□□ 0.88
LMNB1-206ENST00000492190 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
LMNB1-206ENST00000492190 COL20A1Q9P218 1284 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms