RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 ADCY6O43306 1168 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 FDX1P10109 184 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 ITGB8P26012 769 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 STAT2P52630 851 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 TLE2Q04725 743 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 CCSAPQ6IQ19 270 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 RASGRP2Q7LDG7 609 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 KLHDC9Q8NEP7 349 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 PRDM5Q9NQX1 630 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 SNX14Q9Y5W7 946 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 PLA2G6O60733 806 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 SEC24BO95487 1268 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 HMGB1P09429 215 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 MCM5P33992 734 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 ANTXR2P58335 489 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 ANAPC15P60006 121 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 C9orf50Q5SZB4 431 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 BADQ92934 168 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 IL17RAQ96F46 866 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 KATNBL1Q9H079 304 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 ZHX1Q9UKY1 873 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 FAM184BQ9ULE4 1060 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 CTDP1Q9Y5B0 961 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 A0A0C4DFX4 3053 aa17.56■□□□□ 0.4
CDC42SE1-205ENST00000491825 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 CST5P28325 142 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 SLC1A4P43007 532 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 SEC23AQ15436 765 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 SHHQ15465 462 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 ARMCX2Q7L311 632 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 FAM160B2Q86V87 743 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 FAM133AQ8N9E0 248 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 TMEM47Q9BQJ4 181 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
CDC42SE1-205ENST00000491825 KIAA0355O15063 1070 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 CLTBP09497 229 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 ACLYP53396 1101 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 KCTD1Q719H9 257 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 AGBL1Q96MI9 1066 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 ABHD16BQ9H3Z7 469 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 ACAD9Q9H845 621 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 A1CFQ9NQ94 594 aaKnown RBP17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
CDC42SE1-205ENST00000491825 ERICH2A1L162 156 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 MOXD2PA6NHM9 499 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 PRC1O43663 620 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 PSMA5P28066 241 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 CHURC1Q8WUH1 139 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 GUCD1Q96NT3 240 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 TM6SF1Q9BZW5 370 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 UPF3AQ9H1J1 476 aaKnown RBP17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 UNC80Q8N2C7 3258 aa17.53■□□□□ 0.4
CDC42SE1-205ENST00000491825 ASTN1O14525 1302 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 IFIT3O14879 490 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 CTAGE5O15320 804 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 NKX3-2P78367 333 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 FAAP100Q0VG06 881 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 KCNA10Q16322 511 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 TKFCQ3LXA3 575 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 DHX32Q7L7V1 743 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 STARD7Q9NQZ5 370 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CDC42SE1-205ENST00000491825 EYSQ5T1H1 3165 aa17.52■□□□□ 0.39
CDC42SE1-205ENST00000491825 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 SNHG28P0DPA3 235 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 LIFRP42702 1097 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms