RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MSRAQ9UJ68 235 aa15.81■□□□□ 0.12
USF1-206ENST00000491629 PLIN4Q96Q06 1357 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 B4GALT4O60513 344 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 PSMC6P62333 389 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 ITGA7Q13683 1181 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 FSCN1Q16658 493 aaKnown RBP15.8■□□□□ 0.12
USF1-206ENST00000491629 ZSCAN25Q6NSZ9 544 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 RASGRP2Q7LDG7 609 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 TLK2Q86UE8 772 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 GMCL1P1Q8NEA9 526 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
USF1-206ENST00000491629 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 M0R2C6 588 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 BMP3P12645 472 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 BMP1P13497 986 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 TFF2Q03403 129 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 TSHZ3Q63HK5 1081 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 SLFN13Q68D06 897 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 SCLYQ96I15 445 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
USF1-206ENST00000491629 ACAD9Q9H845 621 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 SLC28A3Q9HAS3 691 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 RNF146Q9NTX7 359 aa15.79■□□□□ 0.12
USF1-206ENST00000491629 GPAA1O43292 621 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 TTLL1O95922 423 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 SNAP25P60880 206 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 MUM1L1Q5H9M0 696 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 APPBP2Q92624 585 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 SYNPO2Q9UMS6 1093 aa15.78■□□□□ 0.12
USF1-206ENST00000491629 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
USF1-206ENST00000491629 COL4A4P53420 1690 aaPredicted RBP15.78■□□□□ 0.12
USF1-206ENST00000491629 RFXAPO00287 272 aa15.77■□□□□ 0.12
USF1-206ENST00000491629 RNF113AO15541 343 aaKnown RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 DYNC1LI2O43237 492 aaPredicted RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 TTLL4Q14679 1199 aa15.77■□□□□ 0.12
USF1-206ENST00000491629 NOL8Q76FK4 1167 aaKnown RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.12
USF1-206ENST00000491629 FBXO16Q8IX29 292 aaPredicted RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 ZNF444Q8N0Y2 327 aaPredicted RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 NEDD1Q8NHV4 660 aa15.77■□□□□ 0.12
USF1-206ENST00000491629 SEC62Q99442 399 aaKnown RBP15.77■□□□□ 0.12
USF1-206ENST00000491629 LRRCC1Q9C099 1032 aa15.77■□□□□ 0.12
USF1-206ENST00000491629 EPOPA6NHQ4 379 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 ASB14A6NK59 587 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 CABYRO75952 493 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 ARHGEF15O94989 841 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 KCNQ1P51787 676 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 IFNL3Q8IZI9 196 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 STAG1Q8WVM7 1258 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 TRERF1Q96PN7 1200 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 ALDH8A1Q9H2A2 487 aaPredicted RBP15.76■□□□□ 0.11
USF1-206ENST00000491629 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 CYP39A1Q9NYL5 469 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 PCDHA11Q9Y5I1 949 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 SLC4A7Q9Y6M7 1214 aa15.76■□□□□ 0.11
USF1-206ENST00000491629 RBAK-RBAKDNI3L0D1 243 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 ALAS1P13196 640 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 MCCP23508 829 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 PLA2G5P39877 138 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 TDO2P48775 406 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 STAT2P52630 851 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 PPP2R2DQ66LE6 453 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 KRT40Q6A162 431 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 KCTD1Q719H9 257 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 MORC4Q8TE76 937 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 PPP1R13LQ8WUF5 828 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 GMCL1Q96IK5 515 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 MTIF3Q9H2K0 278 aaKnown RBP15.75■□□□□ 0.11
USF1-206ENST00000491629 INCENPQ9NQS7 918 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
USF1-206ENST00000491629 TRMT13Q9NUP7 481 aaKnown RBP15.75■□□□□ 0.11
USF1-206ENST00000491629 PATL2C9JE40 543 aaKnown RBP15.74■□□□□ 0.11
USF1-206ENST00000491629 FOXP2O15409 715 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 FDX1P10109 184 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 CYP2C9P11712 490 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 TFAP4Q01664 338 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 C20orf194Q5TEA3 1177 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 IQSEC1Q6DN90 963 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 AP5M1Q9H0R1 490 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 Q9Y3F1 56 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 MTCH2Q9Y6C9 303 aa15.74■□□□□ 0.11
USF1-206ENST00000491629 KIAA1217Q5T5P2 1943 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 NMT2O60551 498 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 PLA2G6O60733 806 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 TSPY3P0CV98 308 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 TSPY8P0CW00 308 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 MS4A1P11836 297 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 ATP2A2P16615 1042 aaKnown RBP15.73■□□□□ 0.11
USF1-206ENST00000491629 POU3F3P20264 500 aaPredicted RBP15.73■□□□□ 0.11
USF1-206ENST00000491629 TKFCQ3LXA3 575 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 FAM160B2Q86V87 743 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 CERS4Q9HA82 394 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 PRR12Q9ULL5 1215 aa15.73■□□□□ 0.11
USF1-206ENST00000491629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms