RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 RANBP17Q9H2T7 1088 aaKnown RBP21.65■■□□□ 1.06
SMIM4-205ENST00000491607 RNF41Q9H4P4 317 aaPredicted RBP21.65■■□□□ 1.06
SMIM4-205ENST00000491607 TMEM39AQ9NV64 488 aa21.65■■□□□ 1.06
SMIM4-205ENST00000491607 CYP39A1Q9NYL5 469 aa21.65■■□□□ 1.06
SMIM4-205ENST00000491607 DCDC2CA8MYV0 355 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 ZNF213O14771 459 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 ASGR1P07306 291 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 CST5P28325 142 aaPredicted RBP21.64■■□□□ 1.05
SMIM4-205ENST00000491607 GJA9P57773 515 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 TNFAIP2Q03169 654 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 GNASQ5JWF2 1037 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 C9orf50Q5SZB4 431 aa21.64■■□□□ 1.05
SMIM4-205ENST00000491607 DDX49Q9Y6V7 483 aaKnown RBP21.64■■□□□ 1.05
SMIM4-205ENST00000491607 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.63■■□□□ 1.05
SMIM4-205ENST00000491607 PDHBP11177 359 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 ITGB8P26012 769 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 BTNL9Q6UXG8 535 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 ANKRD33Q7Z3H0 272 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 ESR2Q92731 530 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 ZKSCAN3Q9BRR0 538 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 UPF3AQ9H1J1 476 aaKnown RBP21.63■■□□□ 1.05
SMIM4-205ENST00000491607 MTMR10Q9NXD2 777 aa21.63■■□□□ 1.05
SMIM4-205ENST00000491607 ASTN1O14525 1302 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 ELP1O95163 1332 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 NEDD4P46934 1319 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 KIAA0355O15063 1070 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 FAAP100Q0VG06 881 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 EEPD1Q7L9B9 569 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 SLC17A8Q8NDX2 589 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 TTC14Q96N46 770 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 TOX2Q96NM4 488 aa21.62■■□□□ 1.05
SMIM4-205ENST00000491607 PURBQ96QR8 312 aaKnown RBP21.62■■□□□ 1.05
SMIM4-205ENST00000491607 HIP1O00291 1037 aa21.61■■□□□ 1.05
SMIM4-205ENST00000491607 BEX3Q00994 111 aa21.61■■□□□ 1.05
SMIM4-205ENST00000491607 FBXO16Q8IX29 292 aaPredicted RBP21.61■■□□□ 1.05
SMIM4-205ENST00000491607 FAM161BQ96MY7 647 aa21.61■■□□□ 1.05
SMIM4-205ENST00000491607 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 MCM3APO60318 1980 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 A0A0U1RQG5 324 aaPredicted RBP21.6■■□□□ 1.05
SMIM4-205ENST00000491607 PTPDC1A2A3K4 754 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 NFIBO00712 420 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 FPGSQ05932 587 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 ZNF543Q08ER8 600 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 BAATQ14032 418 aaPredicted RBP21.6■■□□□ 1.05
SMIM4-205ENST00000491607 TLK2Q86UE8 772 aa21.6■■□□□ 1.05
SMIM4-205ENST00000491607 CTAGE5O15320 804 aa21.59■■□□□ 1.05
SMIM4-205ENST00000491607 AP5M1Q9H0R1 490 aa21.59■■□□□ 1.05
SMIM4-205ENST00000491607 PDGFCQ9NRA1 345 aa21.59■■□□□ 1.05
SMIM4-205ENST00000491607 ADD3Q9UEY8 706 aaKnown RBP21.59■■□□□ 1.05
SMIM4-205ENST00000491607 STXBP5LQ9Y2K9 1186 aa21.59■■□□□ 1.05
SMIM4-205ENST00000491607 KDM4AO75164 1064 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 GOLGA8HP0CJ92 632 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 SMPD1P17405 629 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 CALML3P27482 149 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 EPHB4P54760 987 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 ZNF697Q5TEC3 545 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 FAM109BQ6ICB4 259 aaPredicted RBP21.58■■□□□ 1.05
SMIM4-205ENST00000491607 IQCA1Q86XH1 822 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 RNPC3Q96LT9 517 aaKnown RBP21.58■■□□□ 1.05
SMIM4-205ENST00000491607 VTA1Q9NP79 307 aa21.58■■□□□ 1.05
SMIM4-205ENST00000491607 GNEQ9Y223 722 aaKnown RBP21.58■■□□□ 1.05
SMIM4-205ENST00000491607 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
SMIM4-205ENST00000491607 ARVCFO00192 962 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 DYNC1LI2O43237 492 aaPredicted RBP21.57■■□□□ 1.04
SMIM4-205ENST00000491607 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 PTGS1P23219 599 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 CDK7P50613 346 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 FSCN1Q16658 493 aaKnown RBP21.57■■□□□ 1.04
SMIM4-205ENST00000491607 IMMTQ16891 758 aaKnown RBP21.57■■□□□ 1.04
SMIM4-205ENST00000491607 IQSEC1Q6DN90 963 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 TAPT1Q6NXT6 567 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 CXCL17Q6UXB2 119 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 SLC30A10Q6XR72 485 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 KIAA1211Q6ZU35 1233 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 DGKHQ86XP1 1220 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 PNMA2Q9UL42 364 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 LRRC37A2A6NM11 1700 aa21.57■■□□□ 1.04
SMIM4-205ENST00000491607 B4E1Z4 1266 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 TLR3O15455 904 aaKnown RBP21.56■■□□□ 1.04
SMIM4-205ENST00000491607 TIMP1P01033 207 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 ALDH5A1P51649 535 aaPredicted RBP21.56■■□□□ 1.04
SMIM4-205ENST00000491607 NKX3-2P78367 333 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 CCDC178Q5BJE1 867 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 GPATCH4Q5T3I0 446 aaKnown RBP21.56■■□□□ 1.04
SMIM4-205ENST00000491607 RNF207Q6ZRF8 634 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 DSCC1Q9BVC3 393 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 KAT14Q9H8E8 782 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 TBX21Q9UL17 535 aa21.56■■□□□ 1.04
SMIM4-205ENST00000491607 COL6A3P12111 3177 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 ZEB2O60315 1214 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 NT5C2P49902 561 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 USH1GQ495M9 461 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 TMEM63BQ5T3F8 832 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 PNMA1Q8ND90 353 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 MORC4Q8TE76 937 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 CLEC4DQ8WXI8 215 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
SMIM4-205ENST00000491607 UBA5Q9GZZ9 404 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 CPVLQ9H3G5 476 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 CTNNA3Q9UI47 895 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms