RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 FGRP09769 529 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 TOP1P11387 765 aaKnown RBP15.92■□□□□ 0.14
CDK9-204ENST00000491521 RPS6KB1P23443 525 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 RTP1P59025 263 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
CDK9-204ENST00000491521 CNTN2Q02246 1040 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 IL17RAQ96F46 866 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 TRERF1Q96PN7 1200 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 ZSWIM5Q9P217 1185 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 RBM19Q9Y4C8 960 aaKnown RBP15.92■□□□□ 0.14
CDK9-204ENST00000491521 LAMA2P24043 3122 aaKnown RBP15.92■□□□□ 0.14
CDK9-204ENST00000491521 ZNF536O15090 1300 aa15.92■□□□□ 0.14
CDK9-204ENST00000491521 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 DNAJC25-GNG10A0A024R161 153 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 PRC1O43663 620 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 ST18O60284 1047 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 SNAI1O95863 264 aaPredicted RBP15.91■□□□□ 0.14
CDK9-204ENST00000491521 ZNF865P0CJ78 1059 aaPredicted RBP15.91■□□□□ 0.14
CDK9-204ENST00000491521 FDX1P10109 184 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 TCEANC2Q96MN5 208 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
CDK9-204ENST00000491521 CCPG1Q9ULG6 757 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 SYNGAP1Q96PV0 1343 aa15.91■□□□□ 0.14
CDK9-204ENST00000491521 AKR1A1P14550 325 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 CYB5R4Q7L1T6 521 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 RNF180Q86T96 592 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 IQCA1Q86XH1 822 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
CDK9-204ENST00000491521 GDF15Q99988 308 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 UBAC1Q9BSL1 405 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 LRRC2Q9BYS8 371 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 UBE2OQ9C0C9 1292 aaKnown RBP15.9■□□□□ 0.14
CDK9-204ENST00000491521 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
CDK9-204ENST00000491521 PRDM5Q9NQX1 630 aaPredicted RBP15.9■□□□□ 0.14
CDK9-204ENST00000491521 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
CDK9-204ENST00000491521 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
CDK9-204ENST00000491521 ERICH2A1L162 156 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 PLA2G6O60733 806 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 NOVP48745 357 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 ACVR2BQ13705 512 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 COL9A3Q14050 684 aaPredicted RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 NSMFQ6X4W1 530 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 SLC39A5Q6ZMH5 540 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 Q6ZUG5 572 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 ARMCX2Q7L311 632 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 CCDC144CPQ8IYA2 1237 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
CDK9-204ENST00000491521 FGD4Q96M96 766 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 TCP11L1Q9NUJ3 509 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 PRKAG2Q9UGJ0 569 aa15.89■□□□□ 0.13
CDK9-204ENST00000491521 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
CDK9-204ENST00000491521 GOLGA8HP0CJ92 632 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 PDHBP11177 359 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 NT5C2P49902 561 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 ANTXR2P58335 489 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 TKFCQ3LXA3 575 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 TMEM67Q5HYA8 995 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 MAMDC4Q6UXC1 1216 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 NOL8Q76FK4 1167 aaKnown RBP15.88■□□□□ 0.13
CDK9-204ENST00000491521 ZNF467Q7Z7K2 595 aaPredicted RBP15.88■□□□□ 0.13
CDK9-204ENST00000491521 TMEM87BQ96K49 555 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
CDK9-204ENST00000491521 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
CDK9-204ENST00000491521 SOWAHBA6NEL2 793 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 ICAM1P05362 532 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 NFXL1Q6ZNB6 911 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDK9-204ENST00000491521 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 LRCH3Q96II8 777 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 PURBQ96QR8 312 aaKnown RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 ZSCAN10Q96SZ4 725 aaPredicted RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 LARP6Q9BRS8 491 aaKnown RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 RANBP17Q9H2T7 1088 aaKnown RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
CDK9-204ENST00000491521 WDR19Q8NEZ3 1342 aa15.87■□□□□ 0.13
CDK9-204ENST00000491521 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 A0A1W2PQ45 241 aaPredicted RBP15.86■□□□□ 0.13
CDK9-204ENST00000491521 A0A1W2PQY0 241 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 C6orf222P0C671 652 aaPredicted RBP15.86■□□□□ 0.13
CDK9-204ENST00000491521 BMP8BP34820 402 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 AK2P54819 239 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 ZNF543Q08ER8 600 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 WTAPQ15007 396 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 CCDC178Q5BJE1 867 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 TTC14Q96N46 770 aa15.86■□□□□ 0.13
CDK9-204ENST00000491521 CPVLQ9H3G5 476 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms