RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
PFDN6-207ENST00000491382 SENP2Q9HC62 589 aa18.66■□□□□ 0.58
PFDN6-207ENST00000491382 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
PFDN6-207ENST00000491382 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
PFDN6-207ENST00000491382 PTPDC1A2A3K4 754 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ASB14A6NK59 587 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 NFIBO00712 420 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 RARBP10826 455 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 AKR1A1P14550 325 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 TAL1P17542 331 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 KIF5BP33176 963 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 LIFRP42702 1097 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 RNF207Q6ZRF8 634 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ARMCX2Q7L311 632 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 CTCFLQ8NI51 663 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 DIS3LQ8TF46 1054 aaKnown RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 DPF3Q92784 378 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 FGD4Q96M96 766 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 MAP3K14Q99558 947 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 MAF1Q9H063 256 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ABHD16BQ9H3Z7 469 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 C11orf49Q9H6J7 331 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ADD3Q9UEY8 706 aaKnown RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-207ENST00000491382 ABCB11O95342 1321 aa18.65■□□□□ 0.58
PFDN6-207ENST00000491382 LCTP09848 1927 aa18.64■□□□□ 0.58
PFDN6-207ENST00000491382 SNAI1O95863 264 aaPredicted RBP18.64■□□□□ 0.57
PFDN6-207ENST00000491382 HMGB1P09429 215 aaKnown RBP18.64■□□□□ 0.57
PFDN6-207ENST00000491382 ZNF865P0CJ78 1059 aaPredicted RBP18.64■□□□□ 0.57
PFDN6-207ENST00000491382 TRAF1Q13077 416 aa18.64■□□□□ 0.57
PFDN6-207ENST00000491382 BAATQ14032 418 aaPredicted RBP18.64■□□□□ 0.57
PFDN6-207ENST00000491382 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
PFDN6-207ENST00000491382 FBXO11Q86XK2 927 aa18.64■□□□□ 0.57
PFDN6-207ENST00000491382 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
PFDN6-207ENST00000491382 CLEC4DQ8WXI8 215 aa18.64■□□□□ 0.57
PFDN6-207ENST00000491382 MPHOSPH6Q99547 160 aaKnown RBP18.64■□□□□ 0.57
PFDN6-207ENST00000491382 SOWAHBA6NEL2 793 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 DNM1LO00429 736 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 ZBTB5O15062 677 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 CALM1P0DP23 149 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 CALM2P0DP24 149 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 CALM3P0DP25 149 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 MNX1P50219 401 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-207ENST00000491382 ACVR2BQ13705 512 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 AMNQ9BXJ7 453 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 FAM184BQ9ULE4 1060 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
PFDN6-207ENST00000491382 LRRC37A2A6NM11 1700 aa18.63■□□□□ 0.57
PFDN6-207ENST00000491382 LOC102724159A0A0B4J2E5 919 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 KBTBD13C9JR72 458 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
PFDN6-207ENST00000491382 CALML3P27482 149 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 HSPA4P34932 840 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 PWP2Q15269 919 aaKnown RBP18.62■□□□□ 0.57
PFDN6-207ENST00000491382 DHX32Q7L7V1 743 aaKnown RBP18.62■□□□□ 0.57
PFDN6-207ENST00000491382 MCF2L2Q86YR7 1114 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 RASEFQ8IZ41 740 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 RIOX1Q9H6W3 641 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 XPNPEP3Q9NQH7 507 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
PFDN6-207ENST00000491382 GNAQP50148 359 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 RPS6P62753 249 aaKnown RBP18.61■□□□□ 0.57
PFDN6-207ENST00000491382 SLC30A10Q6XR72 485 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 SYNE3Q6ZMZ3 975 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 SGMS1Q86VZ5 419 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 HOMER1Q86YM7 354 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 MTMR8Q96EF0 704 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 MYL10Q9BUA6 226 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 LRRC2Q9BYS8 371 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 GPHNQ9NQX3 736 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-207ENST00000491382 NR2E3Q9Y5X4 410 aa18.61■□□□□ 0.57
PFDN6-207ENST00000491382 B4DLN1 442 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 EVI5O60447 810 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 MYCNP04198 464 aaPredicted RBP18.6■□□□□ 0.57
PFDN6-207ENST00000491382 COL6A1P12109 1028 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 ALDH5A1P51649 535 aaPredicted RBP18.6■□□□□ 0.57
PFDN6-207ENST00000491382 MRPL12P52815 198 aaKnown RBP18.6■□□□□ 0.57
PFDN6-207ENST00000491382 ADCK5Q3MIX3 580 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 RNF180Q86T96 592 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 DNERQ8NFT8 737 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 KCNB2Q92953 911 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 ALPK3Q96L96 1907 aa18.6■□□□□ 0.57
PFDN6-207ENST00000491382 ASTN1O14525 1302 aa18.59■□□□□ 0.57
PFDN6-207ENST00000491382 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
PFDN6-207ENST00000491382 FGD1P98174 961 aa18.59■□□□□ 0.57
PFDN6-207ENST00000491382 EXOSC10Q01780 885 aaKnown RBP18.59■□□□□ 0.57
PFDN6-207ENST00000491382 COL9A3Q14050 684 aaPredicted RBP18.59■□□□□ 0.57
PFDN6-207ENST00000491382 CCDC144BQ3MJ40 725 aa18.59■□□□□ 0.57
PFDN6-207ENST00000491382 GJC2Q5T442 439 aaPredicted RBP18.59■□□□□ 0.57
PFDN6-207ENST00000491382 PIGSQ96S52 555 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms