RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NSMFQ6X4W1 530 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 IQCA1Q86XH1 822 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 LRCH3Q96II8 777 aa21.14■□□□□ 0.97
HMGN1-219ENST00000491183 ZSCAN10Q96SZ4 725 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-219ENST00000491183 TSEN34Q9BSV6 310 aaKnown RBP21.14■□□□□ 0.97
HMGN1-219ENST00000491183 SZT2Q5T011 3432 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 NFIBO00712 420 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 ACLYP53396 1101 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 KCNA10Q16322 511 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 CCDC178Q5BJE1 867 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 TDHQ8IZJ6 230 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 PNMA1Q8ND90 353 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
HMGN1-219ENST00000491183 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-219ENST00000491183 ASB14A6NK59 587 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 PTH1RQ03431 593 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 TLE2Q04725 743 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-219ENST00000491183 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 ENAHQ8N8S7 591 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-219ENST00000491183 KRT23Q9C075 422 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 UBA5Q9GZZ9 404 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 UPF3AQ9H1J1 476 aaKnown RBP21.12■□□□□ 0.97
HMGN1-219ENST00000491183 LTBP2Q14767 1821 aa21.12■□□□□ 0.97
HMGN1-219ENST00000491183 RAD50Q92878 1312 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 CTAGE5O15320 804 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 CST5P28325 142 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-219ENST00000491183 GJA9P57773 515 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 GPATCH4Q5T3I0 446 aaKnown RBP21.11■□□□□ 0.97
HMGN1-219ENST00000491183 LBHD1Q9BQE6 289 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-219ENST00000491183 KAT14Q9H8E8 782 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 PDLIM7Q9NR12 457 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 PRKAG2Q9UGJ0 569 aa21.11■□□□□ 0.97
HMGN1-219ENST00000491183 TNKSO95271 1327 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 TRIM43BA6NCK2 446 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 MOXD2PA6NHM9 499 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-219ENST00000491183 TNFAIP2Q03169 654 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 LRIT3Q3SXY7 679 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 TAPT1Q6NXT6 567 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 CYB5R4Q7L1T6 521 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 MORC4Q8TE76 937 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 TRIM43Q96BQ3 446 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-219ENST00000491183 CNNM2Q9H8M5 875 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 PRDM5Q9NQX1 630 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-219ENST00000491183 PDGFCQ9NRA1 345 aa21.1■□□□□ 0.97
HMGN1-219ENST00000491183 LRRC37A2A6NM11 1700 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 WDR19Q8NEZ3 1342 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 PTGS1P23219 599 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 NKX3-2P78367 333 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 TMEM63BQ5T3F8 832 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 EEPD1Q7L9B9 569 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 STARD7Q9NQZ5 370 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 GNEQ9Y223 722 aaKnown RBP21.09■□□□□ 0.97
HMGN1-219ENST00000491183 LAMA3Q16787 3333 aa21.09■□□□□ 0.97
HMGN1-219ENST00000491183 ASGR1P07306 291 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 CYP21A2P08686 494 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 ITGB8P26012 769 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 SEC23AQ15436 765 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 GNASQ5JWF2 1037 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 SLC30A10Q6XR72 485 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 NUP133Q8WUM0 1156 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 SPC25Q9HBM1 224 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
HMGN1-219ENST00000491183 PTPDC1A2A3K4 754 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 SGSM2O43147 1006 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 SMPD1P17405 629 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 ALDH5A1P51649 535 aaPredicted RBP21.07■□□□□ 0.96
HMGN1-219ENST00000491183 RNF207Q6ZRF8 634 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 FBXO16Q8IX29 292 aaPredicted RBP21.07■□□□□ 0.96
HMGN1-219ENST00000491183 ADGRF4Q8IZF3 695 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 PCSK9Q8NBP7 692 aaKnown RBP21.07■□□□□ 0.96
HMGN1-219ENST00000491183 BADQ92934 168 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 ADD3Q9UEY8 706 aaKnown RBP21.07■□□□□ 0.96
HMGN1-219ENST00000491183 TAF6LQ9Y6J9 622 aa21.07■□□□□ 0.96
HMGN1-219ENST00000491183 PQBP1O60828 265 aaKnown RBP21.06■□□□□ 0.96
HMGN1-219ENST00000491183 CLTBP09497 229 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 CALML3P27482 149 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 CDK7P50613 346 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 RPS6P62753 249 aaKnown RBP21.06■□□□□ 0.96
HMGN1-219ENST00000491183 BEX3Q00994 111 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 USH1GQ495M9 461 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 ASPRV1Q53RT3 343 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 IQSEC1Q6DN90 963 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
HMGN1-219ENST00000491183 ANKRD33Q7Z3H0 272 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 GLT1D1Q96MS3 346 aa21.06■□□□□ 0.96
HMGN1-219ENST00000491183 ELP1O95163 1332 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 KIAA0355O15063 1070 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 FAAP100Q0VG06 881 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 CDC37Q16543 378 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-219ENST00000491183 IFIT1BQ5T764 474 aaKnown RBP21.05■□□□□ 0.96
HMGN1-219ENST00000491183 STAG2Q8N3U4 1231 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 TOX2Q96NM4 488 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
HMGN1-219ENST00000491183 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms