RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 GPKOWQ92917 476 aaPredicted RBP eCLIP21.06■□□□□ 0.96
PRDM2-209ENST00000491134 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
PRDM2-209ENST00000491134 CTDP1Q9Y5B0 961 aaPredicted RBP21.06■□□□□ 0.96
PRDM2-209ENST00000491134 ABCB11O95342 1321 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 GPR25O00155 361 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 ERCC3P19447 782 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 HMGN5P82970 282 aaKnown RBP21.05■□□□□ 0.96
PRDM2-209ENST00000491134 GHRHRQ02643 423 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
PRDM2-209ENST00000491134 EFCC1Q9HA90 598 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 ZNF236Q9UL36 1845 aa21.05■□□□□ 0.96
PRDM2-209ENST00000491134 ALAS1P13196 640 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 COPB2P35606 906 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 CCNA1P78396 465 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
PRDM2-209ENST00000491134 TRAF1Q13077 416 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 HEATR3Q7Z4Q2 680 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 CHST13Q8NET6 341 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 TRERF1Q96PN7 1200 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 MROH8Q9H579 483 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 SH3GLB2Q9NR46 395 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
PRDM2-209ENST00000491134 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.04■□□□□ 0.96
PRDM2-209ENST00000491134 NFIBO00712 420 aa21.03■□□□□ 0.96
PRDM2-209ENST00000491134 LACTBP83111 547 aaPredicted RBP21.03■□□□□ 0.96
PRDM2-209ENST00000491134 SP3Q02447 781 aa21.03■□□□□ 0.96
PRDM2-209ENST00000491134 PPP1R18Q6NYC8 613 aa21.03■□□□□ 0.96
PRDM2-209ENST00000491134 FAM177A1Q8N128 213 aaPredicted RBP21.03■□□□□ 0.96
PRDM2-209ENST00000491134 RGS22Q8NE09 1264 aa21.03■□□□□ 0.96
PRDM2-209ENST00000491134 MRPL11Q9Y3B7 192 aaKnown RBP21.03■□□□□ 0.96
PRDM2-209ENST00000491134 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 GJB2P29033 226 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 MAPK4P31152 587 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 NPY5RQ15761 445 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 NCAPG2Q86XI2 1143 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 TBC1D5Q92609 795 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 ALG1Q9BT22 464 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 BEGAINQ9BUH8 593 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 MAF1Q9H063 256 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 ACAD9Q9H845 621 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 GJB4Q9NTQ9 266 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 VPS54Q9P1Q0 977 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 TSKSQ9UJT2 592 aa21.02■□□□□ 0.96
PRDM2-209ENST00000491134 ADAMTS3O15072 1205 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 BECN1Q14457 450 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 GPR142Q7Z601 462 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 WASF1Q92558 559 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 ARHGAP39Q9C0H5 1083 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 ZMYND12Q9H0C1 365 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 FBXO40Q9UH90 709 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 PLXNA1Q9UIW2 1896 aa21.01■□□□□ 0.95
PRDM2-209ENST00000491134 SLC4A3P48751 1232 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 HSD17B4P51659 736 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 ZNF296Q8WUU4 475 aaPredicted RBP21■□□□□ 0.95
PRDM2-209ENST00000491134 TRIM47Q96LD4 638 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 PHF20Q9BVI0 1012 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 A1CFQ9NQ94 594 aaKnown RBP21■□□□□ 0.95
PRDM2-209ENST00000491134 HTTP42858 3142 aa21■□□□□ 0.95
PRDM2-209ENST00000491134 DNAJC25-GNG10A0A024R161 153 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 MEIS2O14770 477 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 FOXN1O15353 648 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 STRNO43815 780 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 PTPREP23469 700 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 ANP32AP39687 249 aaKnown RBP20.99■□□□□ 0.95
PRDM2-209ENST00000491134 NAPAP54920 295 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 MORN1Q5T089 497 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 PLEKHH3Q7Z736 793 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 USP6NLQ92738 828 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
PRDM2-209ENST00000491134 PIK3CDO00329 1044 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 FKTNO75072 461 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 HSPA8P11142 646 aaKnown RBP20.98■□□□□ 0.95
PRDM2-209ENST00000491134 GRB14Q14449 540 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 TEX2Q8IWB9 1127 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 SAMD3Q8N6K7 520 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 FOXD4L1Q9NU39 408 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 GJD2Q9UKL4 321 aa20.98■□□□□ 0.95
PRDM2-209ENST00000491134 SMCO2A6NFE2 343 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 M0R2N6 131 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 HSPA1AP0DMV8 641 aaKnown RBP20.97■□□□□ 0.95
PRDM2-209ENST00000491134 HSPA1BP0DMV9 641 aaKnown RBP20.97■□□□□ 0.95
PRDM2-209ENST00000491134 PSMC4P43686 418 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 CLK2P49760 499 aaKnown RBP20.97■□□□□ 0.95
PRDM2-209ENST00000491134 MCF2L2Q86YR7 1114 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 DAGLBQ8NCG7 672 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 CCDC148Q8NFR7 591 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 FBXO18Q8NFZ0 1043 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 CD99L2Q8TCZ2 262 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 CCDC12Q8WUD4 166 aaPredicted RBP20.97■□□□□ 0.95
PRDM2-209ENST00000491134 FGD4Q96M96 766 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 PSTPIP2Q9H939 334 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 MAP3K20Q9NYL2 800 aaKnown RBP20.97■□□□□ 0.95
PRDM2-209ENST00000491134 COL20A1Q9P218 1284 aa20.97■□□□□ 0.95
PRDM2-209ENST00000491134 KCNJ14Q9UNX9 436 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms