RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LRRFIP1Q32MZ4 808 aaKnown RBP24.56■■□□□ 1.52
CLIP2-208ENST00000491075 GMCL1Q96IK5 515 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 NACAP1Q9BZK3 213 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 AP5M1Q9H0R1 490 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 LCTP09848 1927 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 SOWAHBA6NEL2 793 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 PATL2C9JE40 543 aaKnown RBP24.55■■□□□ 1.52
CLIP2-208ENST00000491075 ZEB2O60315 1214 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 IKQ13123 557 aaPredicted RBP24.55■■□□□ 1.52
CLIP2-208ENST00000491075 ITGA7Q13683 1181 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 IFNL3Q8IZI9 196 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 ASB2Q96Q27 587 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 SLC28A3Q9HAS3 691 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 CXXC1Q9P0U4 656 aaPredicted RBP24.55■■□□□ 1.52
CLIP2-208ENST00000491075 REV3LO60673 3130 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 ZNF536O15090 1300 aa24.55■■□□□ 1.52
CLIP2-208ENST00000491075 SLC3A2P08195 630 aaKnown RBP24.54■■□□□ 1.52
CLIP2-208ENST00000491075 SLC1A4P43007 532 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 ADGRE1Q14246 886 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 PPP4R3BQ5MIZ7 849 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 STAG1Q8WVM7 1258 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 AGBL1Q96MI9 1066 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 NKX2-4Q9H2Z4 354 aa24.54■■□□□ 1.52
CLIP2-208ENST00000491075 PLA2G6O60733 806 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 MRPS5P82675 430 aaKnown RBP24.53■■□□□ 1.52
CLIP2-208ENST00000491075 TFAP4Q01664 338 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 MIER1Q8N108 512 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 TRERF1Q96PN7 1200 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 NOC4LQ9BVI4 516 aaKnown RBP24.53■■□□□ 1.52
CLIP2-208ENST00000491075 UMODL1Q5DID0 1318 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 TRANK1O15050 2925 aa24.53■■□□□ 1.52
CLIP2-208ENST00000491075 ALAS1P13196 640 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 IGFBP4P22692 258 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 TSHZ3Q63HK5 1081 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 IQSEC1Q6DN90 963 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 OTOP2Q7RTS6 562 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 NAPBQ9H115 298 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 YBX2Q9Y2T7 364 aaKnown RBP24.52■■□□□ 1.52
CLIP2-208ENST00000491075 Q9Y3F1 56 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 GRIN2DO15399 1336 aa24.52■■□□□ 1.52
CLIP2-208ENST00000491075 NCOR1O75376 2440 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 DYNC1LI2O43237 492 aaPredicted RBP24.51■■□□□ 1.51
CLIP2-208ENST00000491075 B4GALT4O60513 344 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 SMPD1P17405 629 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 COL9A1P20849 921 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 CCL23P55773 120 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 ADAMTS19Q8TE59 1207 aa24.51■■□□□ 1.51
CLIP2-208ENST00000491075 MCCP23508 829 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 PPARAQ07869 468 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 CCDC85BQ15834 202 aaPredicted RBP24.5■■□□□ 1.51
CLIP2-208ENST00000491075 FBXO16Q8IX29 292 aaPredicted RBP24.5■■□□□ 1.51
CLIP2-208ENST00000491075 RPUSD2Q8IZ73 545 aaKnown RBP24.5■■□□□ 1.51
CLIP2-208ENST00000491075 IL27Q8NEV9 243 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 TRPV6Q9H1D0 765 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 WNT8AQ9H1J5 351 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 VTA1Q9NP79 307 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 CYP39A1Q9NYL5 469 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 RCAN3Q9UKA8 241 aa24.5■■□□□ 1.51
CLIP2-208ENST00000491075 TAPT1Q6NXT6 567 aa24.49■■□□□ 1.51
CLIP2-208ENST00000491075 PDGFCQ9NRA1 345 aa24.49■■□□□ 1.51
CLIP2-208ENST00000491075 SLC4A7Q9Y6M7 1214 aa24.49■■□□□ 1.51
CLIP2-208ENST00000491075 BDP1A6H8Y1 2624 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 MUM1L1Q5H9M0 696 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 PPP2R2DQ66LE6 453 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 RCSD1Q6JBY9 416 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 KCTD1Q719H9 257 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 EEPD1Q7L9B9 569 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 UHRF1Q96T88 793 aaPredicted RBP24.48■■□□□ 1.51
CLIP2-208ENST00000491075 TSPYL2Q9H2G4 693 aaPredicted RBP24.48■■□□□ 1.51
CLIP2-208ENST00000491075 DCTPP1Q9H773 170 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 PRR12Q9ULL5 1215 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 STX8Q9UNK0 236 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 PCDHA11Q9Y5I1 949 aa24.48■■□□□ 1.51
CLIP2-208ENST00000491075 PFKMP08237 780 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 PTGS1P23219 599 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 PSMC6P62333 389 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 MORC4Q8TE76 937 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 CHMP4CQ96CF2 233 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 SEC62Q99442 399 aaKnown RBP24.47■■□□□ 1.51
CLIP2-208ENST00000491075 CCPG1Q9ULG6 757 aa24.47■■□□□ 1.51
CLIP2-208ENST00000491075 DDX49Q9Y6V7 483 aaKnown RBP24.47■■□□□ 1.51
CLIP2-208ENST00000491075 XIRP2A4UGR9 3374 aa24.46■■□□□ 1.51
CLIP2-208ENST00000491075 TTC41PQ6P2S7 1318 aa24.46■■□□□ 1.51
CLIP2-208ENST00000491075 TSPY2A6NKD2 308 aa24.46■■□□□ 1.51
CLIP2-208ENST00000491075 C20orf194Q5TEA3 1177 aa24.46■■□□□ 1.51
CLIP2-208ENST00000491075 NSMFQ6X4W1 530 aa24.46■■□□□ 1.51
CLIP2-208ENST00000491075 ALDH8A1Q9H2A2 487 aaPredicted RBP24.46■■□□□ 1.51
CLIP2-208ENST00000491075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLIP2-208ENST00000491075 ZBBXA8MT70 800 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 ERC2O15083 957 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 RABGGTBP53611 331 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 SNAP25P60880 206 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 DUSP28Q4G0W2 176 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 FSD1Q9BTV5 496 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 POLR3EQ9NVU0 708 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 ADD3Q9UEY8 706 aaKnown RBP24.45■■□□□ 1.5
CLIP2-208ENST00000491075 TANC1Q9C0D5 1861 aa24.45■■□□□ 1.5
CLIP2-208ENST00000491075 SCN5AQ14524 2016 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 LOC102724159A0A0B4J2E5 919 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms