RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 HEATR3Q7Z4Q2 680 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 ZKSCAN4Q969J2 545 aaPredicted RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 ATP8A1Q9Y2Q0 1164 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 CYP7A1P22680 504 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 CETN2P41208 172 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 RWDD2BP57060 319 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 CUL1Q13616 776 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 PTPROQ16827 1216 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 KIRREL3Q8IZU9 778 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 UHMK1Q8TAS1 419 aaKnown RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 IP6K1Q92551 441 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF532Q9HCE3 1301 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 SLC30A9Q6PML9 568 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 SYCE1Q8N0S2 351 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 MAGOHBQ96A72 148 aaKnown RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 FAM114A2Q9NRY5 505 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.42□□□□□ -0.421e-5■■■■□ 19.8
CRNKL1-204ENST00000490910 MTUS1Q9ULD2 1270 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 GBP7Q8N8V2 638 aaPredicted RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 NSMCE1Q8WV22 266 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 LIMA1Q9UHB6 759 aaKnown RBP12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 GDAQ9Y2T3 454 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 ZFYVE16Q7Z3T8 1539 aa12.42□□□□□ -0.42
CRNKL1-204ENST00000490910 BACH1O14867 736 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF131P52739 623 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 PREPLQ4J6C6 727 aaPredicted RBP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 MMGT1Q8N4V1 131 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 DDX12PQ92771 950 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 CHMP6Q96FZ7 201 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 DHTKD1Q96HY7 919 aaPredicted RBP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 SEC16BQ96JE7 1060 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 TRMT112Q9UI30 125 aaKnown RBP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 ERBB3P21860 1342 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 MMEP08473 750 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 GNAQP50148 359 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 EIF3BP55884 814 aaKnown RBP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 SESN3P58005 492 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 ERVK-24P63145 666 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 PPP2R5EQ16537 467 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 CUL5Q93034 780 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 PSMD1Q99460 953 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 GPR108Q9NPR9 543 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 PRDM1O75626 825 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 KIF9Q9HAQ2 790 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 HPSEQ9Y251 543 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF609O15014 1411 aa12.41□□□□□ -0.42
CRNKL1-204ENST00000490910 MB21D2Q8IYB1 491 aaPredicted RBP12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 TMEM110-MUSTN1A8MSY1 372 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 CHGBP05060 677 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 PDHBP11177 359 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 P2RX5Q93086 422 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 CAPN11Q9UMQ6 739 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 NCK2O43639 380 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 TRIM37O94972 964 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 NBPF4Q96M43 638 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 VCX3BQ9H321 246 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 VCX3AQ9NNX9 186 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
CRNKL1-204ENST00000490910 A0A1W2PQC6 194 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 EIF4E1BA6NMX2 242 aaKnown RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 SKAP2O75563 359 aaPredicted RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 ZNF18P17022 549 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 CDC27P30260 824 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 CABP7Q86V35 215 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 MIPOL1Q8TD10 442 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 PARP2Q9UGN5 583 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms