RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 LRRC37A2A6NM11 1700 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 DCDC2CA8MYV0 355 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 ICAM1P05362 532 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 ASGR1P07306 291 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 GNASQ5JWF2 1037 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 CCSAPQ6IQ19 270 aaPredicted RBP24.7■■□□□ 1.54
SYNE4-205ENST00000490730 CWC27Q6UX04 472 aaKnown RBP24.7■■□□□ 1.54
SYNE4-205ENST00000490730 SLC17A8Q8NDX2 589 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 KATNBL1Q9H079 304 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 RANBP17Q9H2T7 1088 aaKnown RBP24.7■■□□□ 1.54
SYNE4-205ENST00000490730 TCP11L1Q9NUJ3 509 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 CYP39A1Q9NYL5 469 aa24.7■■□□□ 1.54
SYNE4-205ENST00000490730 ITGB8P26012 769 aa24.69■■□□□ 1.54
SYNE4-205ENST00000490730 CST5P28325 142 aaPredicted RBP24.69■■□□□ 1.54
SYNE4-205ENST00000490730 GJA9P57773 515 aa24.69■■□□□ 1.54
SYNE4-205ENST00000490730 TNFAIP2Q03169 654 aa24.69■■□□□ 1.54
SYNE4-205ENST00000490730 UPF3AQ9H1J1 476 aaKnown RBP24.69■■□□□ 1.54
SYNE4-205ENST00000490730 RNF41Q9H4P4 317 aaPredicted RBP24.69■■□□□ 1.54
SYNE4-205ENST00000490730 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.68■■□□□ 1.54
SYNE4-205ENST00000490730 KIAA0355O15063 1070 aa24.68■■□□□ 1.54
SYNE4-205ENST00000490730 EEPD1Q7L9B9 569 aa24.68■■□□□ 1.54
SYNE4-205ENST00000490730 ANKRD33Q7Z3H0 272 aa24.68■■□□□ 1.54
SYNE4-205ENST00000490730 FAM161BQ96MY7 647 aa24.68■■□□□ 1.54
SYNE4-205ENST00000490730 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
SYNE4-205ENST00000490730 ASTN1O14525 1302 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 NEDD4P46934 1319 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 LCTP09848 1927 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 ZNF213O14771 459 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 PCP11498 1178 aaKnown RBP24.67■■□□□ 1.54
SYNE4-205ENST00000490730 BEX3Q00994 111 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 FAAP100Q0VG06 881 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 BTNL9Q6UXG8 535 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 FBXO16Q8IX29 292 aaPredicted RBP24.67■■□□□ 1.54
SYNE4-205ENST00000490730 ESR2Q92731 530 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 TOX2Q96NM4 488 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 PURBQ96QR8 312 aaKnown RBP24.67■■□□□ 1.54
SYNE4-205ENST00000490730 ZKSCAN3Q9BRR0 538 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 OSBPL3Q9H4L5 887 aa24.67■■□□□ 1.54
SYNE4-205ENST00000490730 ELP1O95163 1332 aa24.66■■□□□ 1.54
SYNE4-205ENST00000490730 PDHBP11177 359 aa24.66■■□□□ 1.54
SYNE4-205ENST00000490730 MROH7Q68CQ1 1323 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 A0A0U1RQG5 324 aaPredicted RBP24.65■■□□□ 1.54
SYNE4-205ENST00000490730 PTPDC1A2A3K4 754 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 FPGSQ05932 587 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 BAATQ14032 418 aaPredicted RBP24.65■■□□□ 1.54
SYNE4-205ENST00000490730 TLK2Q86UE8 772 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 TTC14Q96N46 770 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 AP5M1Q9H0R1 490 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 STXBP5LQ9Y2K9 1186 aa24.65■■□□□ 1.54
SYNE4-205ENST00000490730 HIP1O00291 1037 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 NFIBO00712 420 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 EPHB4P54760 987 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 ZNF543Q08ER8 600 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 ZNF697Q5TEC3 545 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 RNPC3Q96LT9 517 aaKnown RBP24.64■■□□□ 1.54
SYNE4-205ENST00000490730 PDGFCQ9NRA1 345 aa24.64■■□□□ 1.54
SYNE4-205ENST00000490730 CTAGE5O15320 804 aa24.63■■□□□ 1.53
SYNE4-205ENST00000490730 SMPD1P17405 629 aa24.63■■□□□ 1.53
SYNE4-205ENST00000490730 PTGS1P23219 599 aa24.63■■□□□ 1.53
SYNE4-205ENST00000490730 FAM109BQ6ICB4 259 aaPredicted RBP24.63■■□□□ 1.53
SYNE4-205ENST00000490730 ARVCFO00192 962 aa24.62■■□□□ 1.53
SYNE4-205ENST00000490730 DYNC1LI2O43237 492 aaPredicted RBP24.62■■□□□ 1.53
SYNE4-205ENST00000490730 KDM4AO75164 1064 aa24.62■■□□□ 1.53
SYNE4-205ENST00000490730 GOLGA8HP0CJ92 632 aa24.62■■□□□ 1.53
SYNE4-205ENST00000490730 CALML3P27482 149 aa24.62■■□□□ 1.53
SYNE4-205ENST00000490730 FSCN1Q16658 493 aaKnown RBP24.62■■□□□ 1.53
SYNE4-205ENST00000490730 CXCL17Q6UXB2 119 aa24.62■■□□□ 1.53
SYNE4-205ENST00000490730 ADD3Q9UEY8 706 aaKnown RBP24.62■■□□□ 1.53
SYNE4-205ENST00000490730 GNEQ9Y223 722 aaKnown RBP24.62■■□□□ 1.53
SYNE4-205ENST00000490730 TIMP1P01033 207 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 CDK7P50613 346 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 TAPT1Q6NXT6 567 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 SLC30A10Q6XR72 485 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 KIAA1211Q6ZU35 1233 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 IQCA1Q86XH1 822 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 VTA1Q9NP79 307 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 TBX21Q9UL17 535 aa24.61■■□□□ 1.53
SYNE4-205ENST00000490730 TLR3O15455 904 aaKnown RBP24.6■■□□□ 1.53
SYNE4-205ENST00000490730 SNHG28P0DPA3 235 aa24.6■■□□□ 1.53
SYNE4-205ENST00000490730 ALDH5A1P51649 535 aaPredicted RBP24.6■■□□□ 1.53
SYNE4-205ENST00000490730 IMMTQ16891 758 aaKnown RBP24.6■■□□□ 1.53
SYNE4-205ENST00000490730 IQSEC1Q6DN90 963 aa24.6■■□□□ 1.53
SYNE4-205ENST00000490730 GUCD1Q96NT3 240 aa24.6■■□□□ 1.53
SYNE4-205ENST00000490730 CPVLQ9H3G5 476 aa24.6■■□□□ 1.53
SYNE4-205ENST00000490730 PNMA2Q9UL42 364 aa24.6■■□□□ 1.53
SYNE4-205ENST00000490730 B4E1Z4 1266 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 ZEB2O60315 1214 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 USH1GQ495M9 461 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 TMEM63BQ5T3F8 832 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 GPATCH4Q5T3I0 446 aaKnown RBP24.59■■□□□ 1.53
SYNE4-205ENST00000490730 RNF207Q6ZRF8 634 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 DGKHQ86XP1 1220 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 PNMA1Q8ND90 353 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 PPP1R12CQ9BZL4 782 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 KAT14Q9H8E8 782 aa24.59■■□□□ 1.53
SYNE4-205ENST00000490730 SUPT16HQ9Y5B9 1047 aaKnown RBP24.59■■□□□ 1.53
SYNE4-205ENST00000490730 NKX3-2P78367 333 aa24.58■■□□□ 1.53
SYNE4-205ENST00000490730 SMAD3P84022 425 aaKnown RBP24.58■■□□□ 1.53
SYNE4-205ENST00000490730 CCDC178Q5BJE1 867 aa24.58■■□□□ 1.53
SYNE4-205ENST00000490730 FAM126BQ8IXS8 530 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms