RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 PFASO15067 1338 aa22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 PSMC4P43686 418 aa22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 RGS22Q8NE09 1264 aa22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 AGBL1Q96MI9 1066 aa22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 V9GY48 417 aaPredicted RBP22.92■■□□□ 1.26
SHROOM3-209ENST00000490690 PFKFB3Q16875 520 aaPredicted RBP22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 POTEEQ6S8J3 1075 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 GPR142Q7Z601 462 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 CMTR1Q8N1G2 835 aaKnown RBP22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 CCDC148Q8NFR7 591 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 TMX3Q96JJ7 454 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 SLC26A6Q9BXS9 759 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 PRDM10Q9NQV6 1147 aa22.91■■□□□ 1.26
SHROOM3-209ENST00000490690 SLC15A5A6NIM6 579 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 SCG2P13521 617 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 USH1GQ495M9 461 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 ANKRD35Q8N283 1001 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 NUDT12Q9BQG2 462 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 PORCNQ9H237 461 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 EFCC1Q9HA90 598 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 TSKSQ9UJT2 592 aa22.9■■□□□ 1.26
SHROOM3-209ENST00000490690 K7ELQ4 463 aaPredicted RBP22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 PTPREP23469 700 aa22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 SNAP25P60880 206 aa22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 HEATR3Q7Z4Q2 680 aa22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 MMP19Q99542 508 aa22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 SH3GLB2Q9NR46 395 aa22.89■■□□□ 1.25
SHROOM3-209ENST00000490690 GRB14Q14449 540 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 BECN1Q14457 450 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 SLC35G1Q2M3R5 365 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 MCTP2Q6DN12 878 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 CCDC83Q8IWF9 413 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 NECAB1Q8N987 351 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 CD99L2Q8TCZ2 262 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 PIBF1Q8WXW3 757 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 CUL5Q93034 780 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 PHKBQ93100 1093 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 DDX11Q96FC9 970 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 MPHOSPH6Q99547 160 aaKnown RBP22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 HOMER2Q9NSB8 354 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 BARHL2Q9NY43 387 aa22.88■■□□□ 1.25
SHROOM3-209ENST00000490690 LARGE1O95461 756 aa22.87■■□□□ 1.25
SHROOM3-209ENST00000490690 RGS2P41220 211 aa22.87■■□□□ 1.25
SHROOM3-209ENST00000490690 LBX1P52954 281 aa22.87■■□□□ 1.25
SHROOM3-209ENST00000490690 PKN2Q16513 984 aaKnown RBP22.87■■□□□ 1.25
SHROOM3-209ENST00000490690 RIPK3Q9Y572 518 aa22.87■■□□□ 1.25
SHROOM3-209ENST00000490690 LOC102724159A0A0B4J2E5 919 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 PTPDC1A2A3K4 754 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 B4DLN1 442 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 GNA11P29992 359 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 MRPL12P52815 198 aaKnown RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 NAPAP54920 295 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 PWP2Q15269 919 aaKnown RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 GALNT17Q6IS24 598 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 FAM184AQ8NB25 1140 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 NSUN7Q8NE18 718 aaKnown RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 BICD2Q8TD16 824 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 TRIM47Q96LD4 638 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 ORC3Q9UBD5 711 aaPredicted RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 ADD3Q9UEY8 706 aaKnown RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 SRRDQ9UH36 339 aa22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 DIS3Q9Y2L1 958 aaKnown RBP22.86■■□□□ 1.25
SHROOM3-209ENST00000490690 ESYT2A0FGR8 921 aa22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 GHRHRQ02643 423 aa22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 MAP2K5Q13163 448 aa22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 RNF207Q6ZRF8 634 aa22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 CTU1Q7Z7A3 348 aaKnown RBP22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 DPP9Q86TI2 863 aa22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 INTS4Q96HW7 963 aaKnown RBP22.85■■□□□ 1.25
SHROOM3-209ENST00000490690 GCOM1H8Y6P7 765 aaPredicted RBP22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 PPP1R11O60927 126 aaPredicted RBP22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 CD2BP2O95400 341 aaKnown RBP22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 HOXC6P09630 235 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 POLR2MP0CAP2 368 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 XRCC5P13010 732 aaKnown RBP22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 CALML3P27482 149 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 ADORA2AP29274 412 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 IRF5Q13568 498 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 TRIM29Q14134 588 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 MORN1Q5T089 497 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 WWC2Q6AWC2 1192 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 NSMFQ6X4W1 530 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 SMARCC2Q8TAQ2 1214 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 APBA2Q99767 749 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 C6orf50Q9HD87 102 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 A1CFQ9NQ94 594 aaKnown RBP22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 TRIM17Q9Y577 477 aa22.84■■□□□ 1.25
SHROOM3-209ENST00000490690 COL11A1P12107 1806 aaPredicted RBP22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 POTEB2H3BUK9 544 aa22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 PEX10O60683 326 aa22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 HSP90AA1P07900 732 aaKnown RBP22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 CUL4AQ13619 759 aa22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 MSL3Q8N5Y2 521 aaKnown RBP22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 CLEC4DQ8WXI8 215 aa22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 PSTPIP2Q9H939 334 aa22.83■■□□□ 1.25
SHROOM3-209ENST00000490690 STXBP3O00186 592 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 PIK3CDO00329 1044 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms