RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 LIG4P49917 911 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 HOOK3Q86VS8 718 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 SERPINA10Q9UK55 444 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 CD2BP2O95400 341 aaKnown RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 CHGBP05060 677 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 CCND2P30279 289 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 PNMA8AQ86V59 439 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 EHBP1Q8NDI1 1231 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 KAZALD1Q96I82 304 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 LARGE1O95461 756 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 CD19P15391 556 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 KIF23Q02241 960 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 MYOCDQ8IZQ8 938 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 POLRMTO00411 1230 aaKnown RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 CYP2J2P51589 502 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 HUNKP57058 714 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 SLC39A14Q15043 492 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 CDC25AP30304 524 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 STAT3P40763 770 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 PNOCQ13519 176 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 FAM26FQ5R3K3 315 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 JPH2Q9BR39 696 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 TMEM39BQ9GZU3 492 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 TRMT44Q8IYL2 757 aaKnown RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L15C9J2P7 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L13C9JLJ4 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L11C9JVI0 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L18D6R9N7 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L22D6RA61 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L17D6RBQ6 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L19D6RCP7 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L20D6RJB6 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 K7ENM7 598 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 ORC4O43929 436 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZNF157P51786 506 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L24Q0WX57 530 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 USP17L6PQ6QN14 398 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 FMNL3Q8IVF7 1028 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZNF830Q96NB3 372 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 RFX7Q2KHR2 1363 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 LAD1O00515 517 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 CXCL9Q07325 125 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 POTEAQ6S8J7 498 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 H0YCG3 227 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 DDR1Q08345 913 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 CUL4AQ13619 759 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 TAX1BP1Q86VP1 789 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 NELFBQ8WX92 580 aa15.96■□□□□ 0.15
ARHGEF39-205ENST00000490638 FAM193AP78312 1265 aa15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 KRT83P78385 493 aa15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 RSPH3Q86UC2 560 aa15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 SRRTQ9BXP5 876 aaKnown RBP15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.14
ARHGEF39-205ENST00000490638 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 HLTFQ14527 1009 aaKnown RBP eCLIP15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 TAF1CQ15572 869 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 MB21D2Q8IYB1 491 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 GJB4Q9NTQ9 266 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 NLRP12P59046 1061 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 CLEC10AQ8IUN9 316 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 CNGA4Q8IV77 575 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 LMBRD1Q9NUN5 540 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 AKT3Q9Y243 479 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 MTMR2Q13614 643 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 IGSF22Q8N9C0 903 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 CSRNP2Q9H175 543 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 PANK4Q9NVE7 773 aa15.95■□□□□ 0.14
ARHGEF39-205ENST00000490638 NR1I2O75469 434 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 ZNF827Q17R98 1081 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 KIFAP3Q92845 792 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 TRERF1Q96PN7 1200 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 NAA15Q9BXJ9 866 aaKnown RBP15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 KRT86O43790 486 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 TACC1O75410 805 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 HDLBPQ00341 1268 aaKnown RBP15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 NSUN6Q8TEA1 469 aaKnown RBP15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 CCDC127Q96BQ5 260 aa15.94■□□□□ 0.14
ARHGEF39-205ENST00000490638 PRMT6Q96LA8 375 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms