RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 DSG3P32926 999 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 TOB1P50616 345 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 DGKZQ13574 1117 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 USH1GQ495M9 461 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 HOXC10Q9NYD6 342 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 RLFQ13129 1914 aa15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 OAZ1P54368 228 aa15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 AP3B2Q13367 1082 aa15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 EARS2Q5JPH6 523 aaKnown RBP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 FTOQ9C0B1 505 aaKnown RBP eCLIP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 GPBP1L1Q9HC44 474 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOA-205ENST00000490305 VWA5AO00534 786 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 ITGBL1O95965 494 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 FOSP01100 380 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 ME1P48163 572 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 ORC2Q13416 577 aaPredicted RBP15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 SNAPC2Q13487 334 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 PTPAQ15257 358 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 GADL1Q6ZQY3 521 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 SAMD3Q8N6K7 520 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 RASGRP4Q8TDF6 673 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 NAP1L4Q99733 375 aaKnown RBP15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 ADAMTS5Q9UNA0 930 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
HLA-DOA-205ENST00000490305 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 PIK3CDO00329 1044 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 ADAMTS3O15072 1205 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 ATP2B1P20020 1258 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 MCF2L2Q86YR7 1114 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 MAP3K20Q9NYL2 800 aaKnown RBP15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 AGTPBP1Q9UPW5 1226 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 ZNF536O15090 1300 aa15.12■□□□□ 0.01
HLA-DOA-205ENST00000490305 COL11A1P12107 1806 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 CUTAO60888 179 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 OSBPP22059 807 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 UBE2SQ16763 222 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 INF2Q27J81 1249 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 TKFCQ3LXA3 575 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 NOM1Q5C9Z4 860 aaKnown RBP15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 ADALQ6DHV7 355 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 MB21D1Q8N884 522 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 GPT2Q8TD30 523 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 ATG4CQ96DT6 458 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 WNK4Q96J92 1243 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 MAF1Q9H063 256 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 EHMT1Q9H9B1 1298 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 PCDHA7Q9UN72 937 aa15.11■□□□□ 0.01
HLA-DOA-205ENST00000490305 SPDYE3A6NKU9 549 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 GCOM1H8Y6P7 765 aaPredicted RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 LAD1O00515 517 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 MEIS2O14770 477 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 POLR2MP0CAP2 368 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 ZBTB48P10074 688 aaPredicted RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 CETPP11597 493 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 GTF2A2P52657 109 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 ZNF174Q15697 407 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 TREML2Q5T2D2 321 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 CPXCR1Q8N123 301 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 KRI1Q8N9T8 703 aaKnown RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 TBCKQ8TEA7 893 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 AGBL1Q96MI9 1066 aa15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 RBBP6Q7Z6E9 1792 aaKnown RBP15.1■□□□□ 0.01
HLA-DOA-205ENST00000490305 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 OPLAHO14841 1288 aa15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 ALAS1P13196 640 aa15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 GCFC2P16383 781 aaKnown RBP15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 GJA5P36382 358 aa15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 ATP2C1P98194 919 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 GHRHRQ02643 423 aa15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 CST9Q5W186 159 aa15.09■□□□□ 0.01
HLA-DOA-205ENST00000490305 ARL6IP4Q66PJ3 421 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms