RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 NYAP1Q6ZVC0 841 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 RTKN2Q8IZC4 609 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 CUL5Q93034 780 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 TMEM260Q9NX78 707 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 PAXBP1Q9Y5B6 917 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 PP2D1A8MPX8 630 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 KIF2AO00139 706 aaPredicted RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 TTBK2Q6IQ55 1244 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 SMYD4Q8IYR2 804 aaPredicted RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 IGSF22Q8N9C0 903 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 GTPBP4Q9BZE4 634 aaKnown RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 YDJCA8MPS7 323 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 CCP110O43303 1012 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 PPP1R11O60927 126 aaPredicted RBP18.12■□□□□ 0.49
SNX5-214ENST00000490175 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.497e-8■■□□□ 11.9
SNX5-214ENST00000490175 PAK1Q13153 545 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 PTPN14Q15678 1187 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 HSP90AA4PQ58FG1 418 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 TTLL6Q8N841 843 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 PSMD1Q99460 953 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 CTNND2Q9UQB3 1225 aa18.12■□□□□ 0.49
SNX5-214ENST00000490175 USP17L10C9JJH3 530 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 C21orf2O43822 256 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 SLC1A4P43007 532 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 STX17P56962 302 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 SPAG1Q07617 926 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 CALCRLQ16602 461 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 SLFN13Q68D06 897 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 PPP4R3AQ6IN85 833 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 APTXQ7Z2E3 356 aaKnown RBP18.11■□□□□ 0.49
SNX5-214ENST00000490175 GMCL1P1Q8NEA9 526 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
SNX5-214ENST00000490175 CCDC94Q9BW85 323 aaPredicted RBP18.11■□□□□ 0.49
SNX5-214ENST00000490175 RAB34Q9BZG1 259 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
SNX5-214ENST00000490175 SYNPO2Q9UMS6 1093 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 ARFGEF1Q9Y6D6 1849 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 USP27XA6NNY8 438 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 ICA1Q05084 483 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 FILIP1LQ4L180 1135 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
SNX5-214ENST00000490175 RHOBTB3O94955 611 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 TUBB4AP04350 444 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 PLCG1P19174 1290 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 SLC16A2P36021 539 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 TECP42680 631 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 AMPD3Q01432 767 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 PDIA5Q14554 519 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 CEP135Q66GS9 1140 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 CCDC47Q96A33 483 aaKnown RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 CALML4Q96GE6 196 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 VPS33BQ9H267 617 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 ADD3Q9UEY8 706 aaKnown RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 FAM196BA6NMK8 535 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 KLRC4O43908 158 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 GCFC2P16383 781 aaKnown RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 SEPT2Q15019 361 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 RSBN1LQ6PCB5 846 aaPredicted RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 NELFBQ8WX92 580 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 PRMT6Q96LA8 375 aaPredicted RBP18.1■□□□□ 0.49
SNX5-214ENST00000490175 TMOD2Q9NZR1 351 aa18.1■□□□□ 0.49
SNX5-214ENST00000490175 LRRC10BA6NIK2 292 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 TNNI2P48788 182 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 STIM1Q13586 685 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 KMT5BQ4FZB7 885 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 ADSSL1Q8N142 457 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 C7orf25Q9BPX7 421 aa18.09■□□□□ 0.49
SNX5-214ENST00000490175 LIMA1Q9UHB6 759 aaKnown RBP18.09■□□□□ 0.49
SNX5-214ENST00000490175 HERC5Q9UII4 1024 aaKnown RBP18.09■□□□□ 0.49
SNX5-214ENST00000490175 PRCPP42785 496 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 QRICH1Q2TAL8 776 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 RBM26Q5T8P6 1007 aaKnown RBP18.08■□□□□ 0.49
SNX5-214ENST00000490175 MCTP2Q6DN12 878 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 GIMAP8Q8ND71 665 aaPredicted RBP18.08■□□□□ 0.49
SNX5-214ENST00000490175 ANKRD20A12PQ8NF67 263 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 MMTAG2Q9BU76 263 aaKnown RBP18.08■□□□□ 0.49
SNX5-214ENST00000490175 TRMT1Q9NXH9 659 aaKnown RBP18.08■□□□□ 0.49
SNX5-214ENST00000490175 STK17AQ9UEE5 414 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 HDAC9Q9UKV0 1011 aa18.08■□□□□ 0.49
SNX5-214ENST00000490175 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.49
SNX5-214ENST00000490175 H7C1D1 291 aa18.08■□□□□ 0.48
SNX5-214ENST00000490175 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.48
SNX5-214ENST00000490175 ARHGAP6O43182 974 aa18.08■□□□□ 0.48
SNX5-214ENST00000490175 EDIL3O43854 480 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms