RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 CCL14Q16627 93 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 SLC9C1Q4G0N8 1177 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
HLA-F-229ENST00000489502 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
HLA-F-229ENST00000489502 FAM217BQ9NTX9 383 aaPredicted RBP16.73■□□□□ 0.27
HLA-F-229ENST00000489502 MYCP01106 439 aaPredicted RBP16.72■□□□□ 0.27
HLA-F-229ENST00000489502 RCAN1P53805 252 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 STK3Q13188 491 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 NSMFQ6X4W1 530 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 ABRAQ8N0Z2 381 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 ANKRD35Q8N283 1001 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 SLAIN1Q8ND83 568 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 TRIB2Q92519 343 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 A1CFQ9NQ94 594 aaKnown RBP16.72■□□□□ 0.27
HLA-F-229ENST00000489502 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
HLA-F-229ENST00000489502 FBXO40Q9UH90 709 aa16.72■□□□□ 0.27
HLA-F-229ENST00000489502 STRNO43815 780 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
HLA-F-229ENST00000489502 GRK4P32298 578 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 EVCP57679 992 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
HLA-F-229ENST00000489502 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
HLA-F-229ENST00000489502 DPP9Q86TI2 863 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 CLEC4DQ8WXI8 215 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
HLA-F-229ENST00000489502 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 MCM3APO60318 1980 aa16.71■□□□□ 0.27
HLA-F-229ENST00000489502 ABCB11O95342 1321 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 INHAP05111 366 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 HOXC6P09630 235 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
HLA-F-229ENST00000489502 FUT2Q10981 343 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 TRIM32Q13049 653 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
HLA-F-229ENST00000489502 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
HLA-F-229ENST00000489502 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 LRRC37A2A6NM11 1700 aa16.7■□□□□ 0.26
HLA-F-229ENST00000489502 DNAJC25-GNG10A0A024R161 153 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 LARGE1O95461 756 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 HMGCRP04035 888 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
HLA-F-229ENST00000489502 ARMC5Q96C12 935 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 FGD4Q96M96 766 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PURBQ96QR8 312 aaKnown RBP16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 PFASO15067 1338 aa16.69■□□□□ 0.26
HLA-F-229ENST00000489502 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 CNTN2Q02246 1040 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
HLA-F-229ENST00000489502 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 ALDH8A1Q9H2A2 487 aaPredicted RBP16.68■□□□□ 0.26
HLA-F-229ENST00000489502 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
HLA-F-229ENST00000489502 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
HLA-F-229ENST00000489502 CCDC196A0A1B0GTZ2 297 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 OPLAHO14841 1288 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 DTNBO60941 627 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 CALML3P27482 149 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 CYP2C19P33261 490 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 BAATQ14032 418 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-229ENST00000489502 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 MTFR1Q15390 333 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 PHKBQ93100 1093 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-229ENST00000489502 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
HLA-F-229ENST00000489502 DDX49Q9Y6V7 483 aaKnown RBP16.67■□□□□ 0.26
HLA-F-229ENST00000489502 ASTN1O14525 1302 aa16.67■□□□□ 0.26
HLA-F-229ENST00000489502 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
HLA-F-229ENST00000489502 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
HLA-F-229ENST00000489502 SCRN1Q12765 414 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 RABEP1Q15276 862 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 NTRK3Q16288 839 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 WWC2Q6AWC2 1192 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 RNF207Q6ZRF8 634 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
HLA-F-229ENST00000489502 BRCA2P51587 3418 aa16.65■□□□□ 0.26
HLA-F-229ENST00000489502 SOWAHBA6NEL2 793 aa16.65■□□□□ 0.26
HLA-F-229ENST00000489502 PPP2R5BQ15173 497 aa16.65■□□□□ 0.26
HLA-F-229ENST00000489502 ME3Q16798 604 aa16.65■□□□□ 0.26
HLA-F-229ENST00000489502 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms