RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 PTPN22Q9Y2R2 807 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 ABCB11O95342 1321 aa17.96■□□□□ 0.46
SMIM11A-206ENST00000489469 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 CYTH3O43739 400 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 ECM2O94769 699 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 PLEKHA8P1O95397 391 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 RGS2P41220 211 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 CAP1Q01518 475 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 MORN1Q5T089 497 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 FBXO46Q6PJ61 603 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 CPLX2Q6PUV4 134 aaKnown RBP17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 RAET1EQ8TD07 263 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 MMP19Q99542 508 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 RBM27Q9P2N5 1060 aaKnown RBP17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 GJD2Q9UKL4 321 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 RIPK3Q9Y572 518 aa17.95■□□□□ 0.46
SMIM11A-206ENST00000489469 ST18O60284 1047 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 CDC27P30260 824 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 FLT3LGP49771 235 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 PRKCZQ05513 592 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 MAP2K5Q13163 448 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 PIGSQ96S52 555 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 PFASO15067 1338 aa17.94■□□□□ 0.46
SMIM11A-206ENST00000489469 CPLX1O14810 134 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 ADORA2AP29274 412 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 SLC35G1Q2M3R5 365 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 USP6NLQ92738 828 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 APBA2Q99767 749 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 FAM217BQ9NTX9 383 aaPredicted RBP17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
SMIM11A-206ENST00000489469 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 PFKFB2O60825 505 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 HOXC6P09630 235 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 ADD1P35611 737 aaKnown RBP17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 CCT2P78371 535 aaKnown RBP17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 USH1GQ495M9 461 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 POTEHQ6S545 545 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 DPP9Q86TI2 863 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 MCF2L2Q86YR7 1114 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 SLAIN1Q8ND83 568 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 PXYLP1Q8TE99 480 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 TPCN1Q9ULQ1 816 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 GABRQQ9UN88 632 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 PCDHA1Q9Y5I3 950 aa17.92■□□□□ 0.46
SMIM11A-206ENST00000489469 CDKL5O76039 1030 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 IFNAR1P17181 557 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 FUT2Q10981 343 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 CMTR1Q8N1G2 835 aaKnown RBP17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 CCDC82Q8N4S0 544 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 SAMD3Q8N6K7 520 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 RGS22Q8NE09 1264 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 LIMCH1Q9UPQ0 1083 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 PTCH2Q9Y6C5 1203 aa17.91■□□□□ 0.46
SMIM11A-206ENST00000489469 ADCY3O60266 1144 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 CYP2B6P20813 491 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 MCM2P49736 904 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 STK3Q13188 491 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 MUM1L1Q5H9M0 696 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 A1CFQ9NQ94 594 aaKnown RBP17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 MAP3K20Q9NYL2 800 aaKnown RBP17.9■□□□□ 0.46
SMIM11A-206ENST00000489469 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 PPP1R11O60927 126 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 GRK4P32298 578 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 NTRK3Q16288 839 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 COL13A1Q5TAT6 717 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 NSMFQ6X4W1 530 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 CLEC4DQ8WXI8 215 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 PIBF1Q8WXW3 757 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 NCOA5Q9HCD5 579 aaKnown RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 V9GY48 417 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 LCTP09848 1927 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 MCM3APO60318 1980 aa17.89■□□□□ 0.45
SMIM11A-206ENST00000489469 DNAJC25-GNG10A0A024R161 153 aa17.88■□□□□ 0.45
SMIM11A-206ENST00000489469 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
SMIM11A-206ENST00000489469 NFIBO00712 420 aa17.88■□□□□ 0.45
SMIM11A-206ENST00000489469 SCRN1Q12765 414 aa17.88■□□□□ 0.45
SMIM11A-206ENST00000489469 ME3Q16798 604 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms