RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 RNF113AO15541 343 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 COL9A1P20849 921 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 IGFBP4P22692 258 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 MIER1Q8N108 512 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 HERVK_113Q902F9 699 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 RAPGEFL1Q9UHV5 662 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 TCF20Q9UGU0 1960 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 FGBP02675 491 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 CCL23P55773 120 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 SNAP25P60880 206 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 NKX3-2P78367 333 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 IKQ13123 557 aaPredicted RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 RAB30Q15771 203 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 TMEM63BQ5T3F8 832 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 TLK2Q86UE8 772 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 SLC43A3Q8NBI5 491 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 ASB2Q96Q27 587 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 PDGFCQ9NRA1 345 aa12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-206ENST00000489313 ZNF536O15090 1300 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 LCTP09848 1927 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 ALAS1P13196 640 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 STAT2P52630 851 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 EEPD1Q7L9B9 569 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 NEDD1Q8NHV4 660 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 ADAMTS19Q8TE59 1207 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 NOC4LQ9BVI4 516 aaKnown RBP12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 AP5M1Q9H0R1 490 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
PTP4A2-206ENST00000489313 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 ASB14A6NK59 587 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 FDX1P10109 184 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 SMPD1P17405 629 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 GNAT2P19087 354 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 MCCP23508 829 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 RABGGTBP53611 331 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 PSMC6P62333 389 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 TFAP4Q01664 338 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 RASGRP2Q7LDG7 609 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-206ENST00000489313 PRRC2BQ5JSZ5 2229 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 B4GALT4O60513 344 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 CABYRO75952 493 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 ZFYP08048 801 aaPredicted RBP12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 MYOGP15173 224 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 MRPS5P82675 430 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 MUM1L1Q5H9M0 696 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 STAG1Q8WVM7 1258 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 GPATCH3Q96I76 525 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 GMCL1Q96IK5 515 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 PURBQ96QR8 312 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
PTP4A2-206ENST00000489313 SLC1A4P43007 532 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 PDE4BQ07343 736 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 TAPT1Q6NXT6 567 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 SCLYQ96I15 445 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 UHRF1Q96T88 793 aaPredicted RBP12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
PTP4A2-206ENST00000489313 ZBBXA8MT70 800 aa12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 ZEB2O60315 1214 aa12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 PPARAQ07869 468 aa12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 TKFCQ3LXA3 575 aa12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
PTP4A2-206ENST00000489313 VWCEQ96DN2 955 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms