RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 RETREG2Q8NC44 543 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 NCOA7Q8NI08 942 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 GTF3C6Q969F1 213 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 OSBP2Q969R2 916 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 SCAND2PQ9GZW5 306 aaPredicted RBP7.77□□□□□ -1.17
PDCD4-209ENST00000489049 CCNL1Q9UK58 526 aaPredicted RBP7.77□□□□□ -1.17
PDCD4-209ENST00000489049 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 MYH14Q7Z406 1995 aaKnown RBP7.77□□□□□ -1.17
PDCD4-209ENST00000489049 ELP1O95163 1332 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 PNPLA7Q6ZV29 1317 aa7.77□□□□□ -1.17
PDCD4-209ENST00000489049 BCORQ6W2J9 1755 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 GPAA1O43292 621 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 CDKL5O76039 1030 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 FGAP02671 866 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 PDE6AP16499 860 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 GJB2P29033 226 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 RCAN1P53805 252 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 NRLP54845 237 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 RPS8P62241 208 aaKnown RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 UBE2HP62256 183 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 TOB2Q14106 344 aaPredicted RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 PPP2R5BQ15173 497 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 CPLX2Q6PUV4 134 aaKnown RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 Q6ZUG5 572 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 TMC4Q7Z404 712 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 CCDC83Q8IWF9 413 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 SYNE4Q8N205 404 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 WFDC12Q8WWY7 111 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 TMEM87BQ96K49 555 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 RNF41Q9H4P4 317 aaPredicted RBP7.76□□□□□ -1.17
PDCD4-209ENST00000489049 LRFN2Q9ULH4 789 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 ZNF804BA4D1E1 1349 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 AFF2P51816 1311 aa7.76□□□□□ -1.17
PDCD4-209ENST00000489049 TCRBV5S4A2TA0A5A2 114 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
PDCD4-209ENST00000489049 OPLAHO14841 1288 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 IDH1O75874 414 aaKnown RBP7.75□□□□□ -1.17
PDCD4-209ENST00000489049 EGFRP00533 1210 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 RFC4P35249 363 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 PHKA1P46020 1223 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 KRT85P78386 507 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 CHRNDQ07001 517 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 PDE4CQ08493 712 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 LRP8Q14114 963 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 C15orf52Q6ZUT6 534 aaKnown RBP7.75□□□□□ -1.17
PDCD4-209ENST00000489049 FAM184AQ8NB25 1140 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 SMARCC2Q8TAQ2 1214 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 STRBPQ96SI9 672 aaKnown RBP7.75□□□□□ -1.17
PDCD4-209ENST00000489049 KRT23Q9C075 422 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 CFAP45Q9UL16 551 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 ZMIZ1Q9ULJ6 1067 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 MTMR6Q9Y217 621 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 USP20Q9Y2K6 914 aa7.75□□□□□ -1.17
PDCD4-209ENST00000489049 SCN7AQ01118 1682 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 M0R2C6 588 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 DEAF1O75398 565 aaPredicted RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 EIF2AK2P19525 551 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 NOS3P29474 1203 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 IREB2P48200 963 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 PKP1Q13835 747 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 RASGRF1Q13972 1273 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 SART3Q15020 963 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 IGF2-ASQ6U949 168 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 CCDC129Q6ZRS4 1044 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 HFE2Q6ZVN8 426 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 FBXO33Q7Z6M2 555 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 NBPF11Q86T75 865 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 FLAD1Q8NFF5 587 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 SEC62Q99442 399 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 GRPEL1Q9HAV7 217 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 PIH1D3Q9NQM4 214 aaKnown RBP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDCD4-209ENST00000489049 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 MINPP1Q9UNW1 487 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 LEMD3Q9Y2U8 911 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 ZNF532Q9HCE3 1301 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 AKAP11Q9UKA4 1901 aa7.74□□□□□ -1.17
PDCD4-209ENST00000489049 BTAF1O14981 1849 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 LY75O60449 1722 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 DDX60Q8IY21 1712 aaKnown RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 H3BQV1 296 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 PDIA3P30101 505 aaKnown RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 LIFRP42702 1097 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 TBC1D9BQ66K14 1250 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 USP48Q86UV5 1035 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 SGMS1Q86VZ5 419 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 TREML1Q86YW5 311 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 MB21D2Q8IYB1 491 aaPredicted RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 BRF1Q92994 677 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms