RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 AGBL1Q96MI9 1066 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 ASB2Q96Q27 587 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
USP11-210ENST00000489030 GNEQ9Y223 722 aaKnown RBP13.63□□□□□ -0.23
USP11-210ENST00000489030 SMPD1P17405 629 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 NKX3-2P78367 333 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
USP11-210ENST00000489030 PPP1R13LQ8WUF5 828 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
USP11-210ENST00000489030 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
USP11-210ENST00000489030 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 THEGQ9P2T0 379 aa13.62□□□□□ -0.23
USP11-210ENST00000489030 RFXAPO00287 272 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 TNFAIP2Q03169 654 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
USP11-210ENST00000489030 EEPD1Q7L9B9 569 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 CHST13Q8NET6 341 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 ATXN2LQ8WWM7 1075 aaKnown RBP13.61□□□□□ -0.23
USP11-210ENST00000489030 MKL1Q969V6 931 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
USP11-210ENST00000489030 HIPK3Q9H422 1215 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 FEM1BQ9UK73 627 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 GBF1Q92538 1859 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 MROH7Q68CQ1 1323 aa13.61□□□□□ -0.23
USP11-210ENST00000489030 DYNC1LI2O43237 492 aaPredicted RBP13.6□□□□□ -0.23
USP11-210ENST00000489030 GPAA1O43292 621 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 B4GALT4O60513 344 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 FGBP02675 491 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 TFF2Q03403 129 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 NOL8Q76FK4 1167 aaKnown RBP13.6□□□□□ -0.23
USP11-210ENST00000489030 TLK2Q86UE8 772 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
USP11-210ENST00000489030 SCLYQ96I15 445 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 SEC62Q99442 399 aaKnown RBP13.6□□□□□ -0.23
USP11-210ENST00000489030 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 PRRC2BQ5JSZ5 2229 aaKnown RBP13.6□□□□□ -0.23
USP11-210ENST00000489030 MYH4Q9Y623 1939 aa13.6□□□□□ -0.23
USP11-210ENST00000489030 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 EPOPA6NHQ4 379 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 TMEM232C9JQI7 657 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 NMT2O60551 498 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 FSCN1Q16658 493 aaKnown RBP13.59□□□□□ -0.23
USP11-210ENST00000489030 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 KRT40Q6A162 431 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 MICALL1Q8N3F8 863 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 APPBP2Q92624 585 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
USP11-210ENST00000489030 ACAD9Q9H845 621 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 CTDP1Q9Y5B0 961 aaPredicted RBP13.59□□□□□ -0.23
USP11-210ENST00000489030 TCF20Q9UGU0 1960 aaKnown RBP13.59□□□□□ -0.23
USP11-210ENST00000489030 REV3LO60673 3130 aa13.59□□□□□ -0.23
USP11-210ENST00000489030 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 FOXP2O15409 715 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 RNF113AO15541 343 aaKnown RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 TTLL1O95922 423 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 CYP2C9P11712 490 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 BMP3P12645 472 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 MCCP23508 829 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 TDO2P48775 406 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 KCNQ1P51787 676 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 OAZ1P54368 228 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 RAB30Q15771 203 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 ZNF444Q8N0Y2 327 aaPredicted RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 TRMT13Q9NUP7 481 aaKnown RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 FBXO40Q9UH90 709 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
USP11-210ENST00000489030 LCTP09848 1927 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
USP11-210ENST00000489030 ALAS1P13196 640 aa13.57□□□□□ -0.24
USP11-210ENST00000489030 TFAP4Q01664 338 aa13.57□□□□□ -0.24
USP11-210ENST00000489030 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
USP11-210ENST00000489030 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
USP11-210ENST00000489030 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms