RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SYNRGQ9UMZ2 1314 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 ADAMTS4O75173 837 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 PGK1P00558 417 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 MAGEA10P43363 369 aaPredicted RBP16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 SNX17Q15036 470 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 C1orf53Q5VUE5 145 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 TSEN34Q9BSV6 310 aaKnown RBP16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 ADD3Q9UEY8 706 aaKnown RBP16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 ATP11BQ9Y2G3 1177 aa16.17■□□□□ 0.18
SPTLC1-207ENST00000488921 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 MOXD2PA6NHM9 499 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 SGSM2O43147 1006 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 CCDC144BQ3MJ40 725 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 NUP133Q8WUM0 1156 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 LENG1Q96BZ8 264 aaPredicted RBP16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
SPTLC1-207ENST00000488921 A0A1W2PQ45 241 aaPredicted RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 A0A1W2PQY0 241 aa16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 PCSK9Q8NBP7 692 aaKnown RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 UBE2OQ9C0C9 1292 aaKnown RBP16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
SPTLC1-207ENST00000488921 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 NFIBO00712 420 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 NEFLP07196 543 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 GOLGA8HP0CJ92 632 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 MAF1Q9H063 256 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 VTA1Q9NP79 307 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 PCDH10Q9P2E7 1040 aa16.14■□□□□ 0.17
SPTLC1-207ENST00000488921 ERICH2A1L162 156 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 CYP21A2P08686 494 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 ACLYP53396 1101 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 GJA9P57773 515 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 PTH1RQ03431 593 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 RNF207Q6ZRF8 634 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 GLT1D1Q96MS3 346 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 ASTN1O14525 1302 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 MROH7Q68CQ1 1323 aa16.13■□□□□ 0.17
SPTLC1-207ENST00000488921 B4DLN1 442 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 ADCY6O43306 1168 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 MDM2Q00987 491 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 KCNA10Q16322 511 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 USH1GQ495M9 461 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 NCOA7Q8NI08 942 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 UBA5Q9GZZ9 404 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 ABCB11O95342 1321 aa16.12■□□□□ 0.17
SPTLC1-207ENST00000488921 E7EWF7 191 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 CALML3P27482 149 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 NKX3-2P78367 333 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 SEC23AQ15436 765 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 IQSEC1Q6DN90 963 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 SLC30A10Q6XR72 485 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 TLK2Q86UE8 772 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 FBXO16Q8IX29 292 aaPredicted RBP16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 RGS22Q8NE09 1264 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 DNERQ8NFT8 737 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 PDLIM7Q9NR12 457 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 ELP1O95163 1332 aa16.11■□□□□ 0.17
SPTLC1-207ENST00000488921 LAMA3Q16787 3333 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 KIAA1217Q5T5P2 1943 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 ASGR1P07306 291 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 CLTBP09497 229 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 TLE2Q04725 743 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 GNASQ5JWF2 1037 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms