RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CASP8AP2Q9UKL3 1982 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 MYO3BQ8WXR4 1341 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 ECM29Q5VYK3 1845 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 UBTFL1P0CB47 393 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 ACPPP15309 386 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 HIBADHP31937 336 aaKnown RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 ZNF157P51786 506 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 RBM5P52756 815 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 KIF23Q02241 960 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 MAP2K1Q02750 393 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 PTPN12Q05209 780 aaKnown RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 UBE4AQ14139 1066 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 CFAP100Q494V2 611 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 C15orf52Q6ZUT6 534 aaKnown RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 VGLL2Q8N8G2 317 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 ZBED3Q96IU2 234 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 PRMT6Q96LA8 375 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-213ENST00000488386 VEZTQ9HBM0 779 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 DCTN4Q9UJW0 460 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 HDAC9Q9UKV0 1011 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 ARAP2Q8WZ64 1704 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 MYH13Q9UKX3 1938 aa7.37□□□□□ -1.23
CDHR3-213ENST00000488386 PAPPA2Q9BXP8 1791 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 MROH5Q6ZUA9 1318 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 EYA2O00167 538 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 EREGO14944 169 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 EIF2AK2P19525 551 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 MAPK1P28482 360 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 MARSP56192 900 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 ORC1Q13415 861 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 MFSD14BQ5SR56 506 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 KANK3Q6NY19 840 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 ATG9AQ7Z3C6 839 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 TMC7Q7Z402 723 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 RASAL3Q86YV0 1011 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 SNX29Q8TEQ0 813 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 TRIM11Q96F44 468 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 RBCK1Q9BYM8 510 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 API5Q9BZZ5 524 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 SSC5DA1L4H1 1573 aa7.36□□□□□ -1.23
CDHR3-213ENST00000488386 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-213ENST00000488386 PITPNM2Q9BZ72 1349 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 FRAT2O75474 233 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-213ENST00000488386 KIF4AO95239 1232 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 PDE8BO95263 885 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 TRIM27P14373 513 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 FGFR2P21802 821 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 ADORA1P30542 326 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 MAP2K2P36507 400 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 GSK3AP49840 483 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 CACNB3P54284 484 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 ATP11AP98196 1134 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 EHHADHQ08426 723 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 ADAMTSL4Q6UY14 1074 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 TTC16Q8NEE8 873 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
CDHR3-213ENST00000488386 TDRD3Q9H7E2 651 aaKnown RBP7.35□□□□□ -1.23
CDHR3-213ENST00000488386 JPH1Q9HDC5 661 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-213ENST00000488386 FAM205AQ6ZU69 1335 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 PHF20L1A8MW92 1017 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 TCP10L2B9ZVM9 353 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 PHACTR2O75167 634 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 TRPA1O75762 1119 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 POLR3DP05423 398 aaPredicted RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 CT47B1P0C2W7 299 aaPredicted RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 NID1P14543 1247 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 CES1P23141 567 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 CRKP46108 304 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 NBPF12Q5TAG4 269 aaPredicted RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 APOBEC3FQ8IUX4 373 aaKnown RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 TMEM57Q8N5G2 664 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 HHIPL1Q96JK4 782 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 CSRNP1Q96S65 589 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 SMG9Q9H0W8 520 aaKnown RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 DEFB129Q9H1M3 183 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 PRDM10Q9NQV6 1147 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 SALL4Q9UJQ4 1053 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 ANGEL1Q9UNK9 670 aaKnown RBP7.34□□□□□ -1.23
CDHR3-213ENST00000488386 AKAP11Q9UKA4 1901 aa7.34□□□□□ -1.23
CDHR3-213ENST00000488386 OTOFQ9HC10 1997 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 PNMA6EA0A0J9YXQ4 647 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 RLBP1P12271 317 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 SLC5A1P13866 664 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 PHKA1P46020 1223 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 HYAL2Q12891 473 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 NOGQ13253 232 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 RASA3Q14644 834 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms