RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FLT3LGP49771 235 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 PRKCZQ05513 592 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 ARMC5Q96C12 935 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 GABRQQ9UN88 632 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
C9orf3-219ENST00000488186 ABCB11O95342 1321 aa18.22■□□□□ 0.51
C9orf3-219ENST00000488186 CYTH3O43739 400 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 CDC27P30260 824 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 KIF2CQ99661 725 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 BIN2Q9UBW5 565 aaPredicted RBP18.21■□□□□ 0.51
C9orf3-219ENST00000488186 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 PCDHA1Q9Y5I3 950 aa18.21■□□□□ 0.51
C9orf3-219ENST00000488186 XRCC5P13010 732 aaKnown RBP18.2■□□□□ 0.5
C9orf3-219ENST00000488186 ADORA2AP29274 412 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 GRB14Q14449 540 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 MORN1Q5T089 497 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 NSMFQ6X4W1 530 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 NCOA5Q9HCD5 579 aaKnown RBP18.2■□□□□ 0.5
C9orf3-219ENST00000488186 TPCN1Q9ULQ1 816 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 LIMCH1Q9UPQ0 1083 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 V9GY48 417 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-219ENST00000488186 PLXNB2O15031 1838 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 CENPFP49454 3210 aa18.2■□□□□ 0.5
C9orf3-219ENST00000488186 MUM1L1Q5H9M0 696 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 MCF2L2Q86YR7 1114 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 SLAIN1Q8ND83 568 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 USP6NLQ92738 828 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-219ENST00000488186 PTCH2Q9Y6C5 1203 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
C9orf3-219ENST00000488186 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
C9orf3-219ENST00000488186 hCG_1642624A0A1W2PR95 340 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 ADCY3O60266 1144 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 PFKFB2O60825 505 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 CDKL5O76039 1030 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 TAL1P17542 331 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 ZSCAN31Q96LW9 406 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
C9orf3-219ENST00000488186 PFASO15067 1338 aa18.18■□□□□ 0.5
C9orf3-219ENST00000488186 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
C9orf3-219ENST00000488186 POTEB2H3BUK9 544 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 PGK2P07205 417 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 HOXC6P09630 235 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 CAPN2P17655 700 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 SLC9C1Q4G0N8 1177 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 RNF207Q6ZRF8 634 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 APBA2Q99767 749 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 NID2Q14112 1375 aa18.17■□□□□ 0.5
C9orf3-219ENST00000488186 BAZ2BQ9UIF8 2168 aaKnown RBP18.16■□□□□ 0.5
C9orf3-219ENST00000488186 NFIBO00712 420 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 IFNAR1P17181 557 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 GRK4P32298 578 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 MCM2P49736 904 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 SCRN1Q12765 414 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 ME3Q16798 604 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 PHKBQ93100 1093 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 ZNF333Q96JL9 665 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 A1CFQ9NQ94 594 aaKnown RBP18.16■□□□□ 0.5
C9orf3-219ENST00000488186 RBBP6Q7Z6E9 1792 aaKnown RBP18.16■□□□□ 0.5
C9orf3-219ENST00000488186 CNTNAP5Q8WYK1 1306 aa18.16■□□□□ 0.5
C9orf3-219ENST00000488186 PRPF3O43395 683 aaKnown RBP18.15■□□□□ 0.5
C9orf3-219ENST00000488186 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-219ENST00000488186 COBLO75128 1261 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 CFBP00751 764 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 CALML3P27482 149 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 BAATQ14032 418 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-219ENST00000488186 RGS22Q8NE09 1264 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 SH2B1Q9NRF2 756 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-219ENST00000488186 CYP39A1Q9NYL5 469 aa18.15■□□□□ 0.5
C9orf3-219ENST00000488186 ELNP15502 786 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 NAPAP54920 295 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 UBXN2AP68543 259 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 FUT2Q10981 343 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 NPLOC4Q8TAT6 608 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 CUL5Q93034 780 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 RNF26Q9BY78 433 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-219ENST00000488186 MAF1Q9H063 256 aa18.14■□□□□ 0.49
C9orf3-219ENST00000488186 DIS3Q9Y2L1 958 aaKnown RBP18.14■□□□□ 0.49
C9orf3-219ENST00000488186 MYH6P13533 1939 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 GCOM1H8Y6P7 765 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-219ENST00000488186 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
C9orf3-219ENST00000488186 POLR2MP0CAP2 368 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms