RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 FAM184BQ9ULE4 1060 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 PTPDC1A2A3K4 754 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 PGK1P00558 417 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 ATN1P54259 1190 aaPredicted RBP27.7■■■□□ 2.02
RNF38-208ENST00000488058 BAATQ14032 418 aaPredicted RBP27.7■■■□□ 2.02
RNF38-208ENST00000488058 WTAPQ15007 396 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 LRRC41Q15345 812 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 LRRC26Q2I0M4 334 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 CHRDL2Q6WN34 429 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 ADGRF4Q8IZF3 695 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 PURBQ96QR8 312 aaKnown RBP27.7■■■□□ 2.02
RNF38-208ENST00000488058 ABHD16BQ9H3Z7 469 aa27.7■■■□□ 2.02
RNF38-208ENST00000488058 ZMYND8Q9ULU4 1186 aaPredicted RBP27.7■■■□□ 2.02
RNF38-208ENST00000488058 COLQQ9Y215 455 aaPredicted RBP27.7■■■□□ 2.02
RNF38-208ENST00000488058 WDR19Q8NEZ3 1342 aa27.69■■■□□ 2.02
RNF38-208ENST00000488058 LCTP09848 1927 aa27.69■■■□□ 2.02
RNF38-208ENST00000488058 MYH6P13533 1939 aa27.69■■■□□ 2.02
RNF38-208ENST00000488058 ASB14A6NK59 587 aa27.69■■■□□ 2.02
RNF38-208ENST00000488058 CDC45O75419 566 aa27.69■■■□□ 2.02
RNF38-208ENST00000488058 SLC27A2O14975 620 aa27.68■■■□□ 2.02
RNF38-208ENST00000488058 TMEM67Q5HYA8 995 aa27.68■■■□□ 2.02
RNF38-208ENST00000488058 MB21D2Q8IYB1 491 aaPredicted RBP27.68■■■□□ 2.02
RNF38-208ENST00000488058 STAG2Q8N3U4 1231 aa27.68■■■□□ 2.02
RNF38-208ENST00000488058 SENP2Q9HC62 589 aa27.68■■■□□ 2.02
RNF38-208ENST00000488058 DDX49Q9Y6V7 483 aaKnown RBP27.68■■■□□ 2.02
RNF38-208ENST00000488058 SYN1P17600 705 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 CALML3P27482 149 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 ANTXR2P58335 489 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 CCDC144BQ3MJ40 725 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 SLC30A10Q6XR72 485 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 RNF207Q6ZRF8 634 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 RNF180Q86T96 592 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 CLEC4DQ8WXI8 215 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 FERMT2Q96AC1 680 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 ASTN1O14525 1302 aa27.67■■■□□ 2.02
RNF38-208ENST00000488058 KLRF2D3W0D1 207 aa27.66■■■□□ 2.02
RNF38-208ENST00000488058 ADCYAP1R1P41586 468 aa27.66■■■□□ 2.02
RNF38-208ENST00000488058 CREB3L3Q68CJ9 461 aa27.66■■■□□ 2.02
RNF38-208ENST00000488058 LRRC37A2A6NM11 1700 aa27.65■■■□□ 2.02
RNF38-208ENST00000488058 QRICH1Q2TAL8 776 aa27.65■■■□□ 2.02
RNF38-208ENST00000488058 HABP4Q5JVS0 413 aaKnown RBP27.65■■■□□ 2.02
RNF38-208ENST00000488058 EEPD1Q7L9B9 569 aa27.65■■■□□ 2.02
RNF38-208ENST00000488058 JMJD4Q9H9V9 463 aa27.65■■■□□ 2.02
RNF38-208ENST00000488058 ADD3Q9UEY8 706 aaKnown RBP27.65■■■□□ 2.02
RNF38-208ENST00000488058 SYNRGQ9UMZ2 1314 aa27.65■■■□□ 2.02
RNF38-208ENST00000488058 KATNBL1Q9H079 304 aa27.64■■■□□ 2.02
RNF38-208ENST00000488058 MAD2L2Q9UI95 211 aa27.64■■■□□ 2.02
RNF38-208ENST00000488058 ADCY6O43306 1168 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 PRC1O43663 620 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 ALDH5A1P51649 535 aaPredicted RBP27.63■■■□□ 2.01
RNF38-208ENST00000488058 GRM4Q14833 912 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 NECTIN1Q15223 517 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 NOL8Q76FK4 1167 aaKnown RBP27.63■■■□□ 2.01
RNF38-208ENST00000488058 CATIPQ7Z7H3 387 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 FBXO11Q86XK2 927 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 FBXO16Q8IX29 292 aaPredicted RBP27.63■■■□□ 2.01
RNF38-208ENST00000488058 ABCB11O95342 1321 aa27.63■■■□□ 2.01
RNF38-208ENST00000488058 ADAMTS4O75173 837 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 DUSP11O75319 330 aaKnown RBP27.62■■■□□ 2.01
RNF38-208ENST00000488058 RTP1P59025 263 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 RPS6P62753 249 aaKnown RBP27.62■■■□□ 2.01
RNF38-208ENST00000488058 IGDCC4Q8TDY8 1250 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 NUP133Q8WUM0 1156 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 ATP11BQ9Y2G3 1177 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 CEP290O15078 2479 aa27.62■■■□□ 2.01
RNF38-208ENST00000488058 PALM3A6NDB9 673 aaPredicted RBP27.61■■■□□ 2.01
RNF38-208ENST00000488058 C6orf222P0C671 652 aaPredicted RBP27.61■■■□□ 2.01
RNF38-208ENST00000488058 MCM5P33992 734 aa27.61■■■□□ 2.01
RNF38-208ENST00000488058 RNF20Q5VTR2 975 aa27.61■■■□□ 2.01
RNF38-208ENST00000488058 SLC39A5Q6ZMH5 540 aa27.61■■■□□ 2.01
RNF38-208ENST00000488058 SPC25Q9HBM1 224 aa27.61■■■□□ 2.01
RNF38-208ENST00000488058 GPHNQ9NQX3 736 aaPredicted RBP27.61■■■□□ 2.01
RNF38-208ENST00000488058 PHF24Q9UPV7 400 aa27.61■■■□□ 2.01
RNF38-208ENST00000488058 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.6■■■□□ 2.01
RNF38-208ENST00000488058 TNFAIP2Q03169 654 aa27.6■■■□□ 2.01
RNF38-208ENST00000488058 NFXL1Q6ZNB6 911 aa27.6■■■□□ 2.01
RNF38-208ENST00000488058 HOMER1Q86YM7 354 aa27.6■■■□□ 2.01
RNF38-208ENST00000488058 PCDH10Q9P2E7 1040 aa27.6■■■□□ 2.01
RNF38-208ENST00000488058 RBM27Q9P2N5 1060 aaKnown RBP27.6■■■□□ 2.01
RNF38-208ENST00000488058 MYADML2A6NDP7 307 aa27.59■■■□□ 2.01
RNF38-208ENST00000488058 IRX5P78411 483 aaPredicted RBP27.59■■■□□ 2.01
RNF38-208ENST00000488058 MYL10Q9BUA6 226 aa27.59■■■□□ 2.01
RNF38-208ENST00000488058 AMNQ9BXJ7 453 aa27.59■■■□□ 2.01
RNF38-208ENST00000488058 LY9Q9HBG7 655 aa27.59■■■□□ 2.01
RNF38-208ENST00000488058 PDGFCQ9NRA1 345 aa27.59■■■□□ 2.01
RNF38-208ENST00000488058 MRPL11Q9Y3B7 192 aaKnown RBP27.59■■■□□ 2.01
RNF38-208ENST00000488058 CENPBP07199 599 aaPredicted RBP27.58■■■□□ 2.01
RNF38-208ENST00000488058 TROAPQ12815 778 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 TRIM60Q495X7 471 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 ZNF654Q8IZM8 581 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 TBC1D5Q92609 795 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 TMEM87BQ96K49 555 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 MPHOSPH6Q99547 160 aaKnown RBP27.58■■■□□ 2.01
RNF38-208ENST00000488058 VTA1Q9NP79 307 aa27.58■■■□□ 2.01
RNF38-208ENST00000488058 A0A1W2PQ45 241 aaPredicted RBP27.57■■■□□ 2
RNF38-208ENST00000488058 A0A1W2PQY0 241 aa27.57■■■□□ 2
RNF38-208ENST00000488058 CCDC69A6NI79 296 aa27.57■■■□□ 2
RNF38-208ENST00000488058 ACLYP53396 1101 aa27.57■■■□□ 2
RNF38-208ENST00000488058 PDE4DQ08499 809 aa27.57■■■□□ 2
RNF38-208ENST00000488058 COL9A3Q14050 684 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms