RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FAM169BQ8N8A8 192 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 SHDQ96IW2 340 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 SEC16BQ96JE7 1060 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 SORCS2Q96PQ0 1159 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 EHMT1Q9H9B1 1298 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 SMPD4Q9NXE4 827 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 REV1Q9UBZ9 1251 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 KLHL3Q9UH77 587 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 ZNRF3Q9ULT6 936 aa4.56□□□□□ -1.68
R3HDM1-219ENST00000488035 CHURC1-FNTBB4DL54 471 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 MATN3O15232 486 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ATE1O95260 518 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ETFBP38117 255 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 MAPKAPK2P49137 400 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ZNF165P49910 485 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ADAM17P78536 824 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 MLECQ14165 292 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 BBS9Q3SYG4 887 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 FBXW10Q5XX13 1052 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 LIPIQ6XZB0 460 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 RUFY4Q6ZNE9 571 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 FERMT3Q86UX7 667 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 LSRQ86X29 649 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 REXO1Q8N1G1 1221 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 SPATA32Q96LK8 384 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 KIF2CQ99661 725 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ZNF408Q9H9D4 720 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 TNFRSF12AQ9NP84 129 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 USP35Q9P2H5 1018 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 SUSD2Q9UGT4 822 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 ACSL6Q9UKU0 697 aa4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 GPR55Q9Y2T6 319 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-219ENST00000488035 RGS13O14921 159 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 FSHBP01225 129 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 MSL3P1P0C860 447 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 GTF2F1P35269 517 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 LIMS1P48059 325 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 NBPF9Q3BBW0 867 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 CPZQ66K79 652 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 OVOS1Q6IE37 1185 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 VPS37DQ86XT2 251 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 NUP43Q8NFH3 380 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 ANAPC16Q96DE5 110 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 FERD3LQ96RJ6 166 aa4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 SRRTQ9BXP5 876 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-219ENST00000488035 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.54□□□□□ -1.682e-12■■■■□ 22.8
R3HDM1-219ENST00000488035 A0A1W2PQ27 194 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 A0A1W2PQ64 194 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 A0A1W2PQC6 194 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 A0A1W2PQD8 194 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 SH3D21A4FU49 640 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 ITGB3P05106 788 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 SSBP05455 408 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 ATP2B1P20020 1258 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 POLR2BP30876 1174 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 GIPRP48546 466 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 ZNF200P98182 395 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 COL9A2Q14055 689 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 SF3A1Q15459 793 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 ZPBP2Q6X784 338 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 TMC3Q7Z5M5 1100 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 SLCO6A1Q86UG4 719 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 DRC1Q96MC2 740 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 DNAJC2Q99543 621 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 PMF1-BGLAPU3KQ54 211 aa4.53□□□□□ -1.68
R3HDM1-219ENST00000488035 FAM86C2PA6NEL3 165 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 MEIS3P2A8K0S8 358 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 SIGLEC6O43699 453 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 PRAMEF1O95521 474 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 ACRP10323 421 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 EIF6P56537 245 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 GJA9P57773 515 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 FOXO4P98177 505 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 KIR3DS1Q14943 382 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 ZYXQ15942 572 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 VWA3BQ502W6 1294 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 SAPCD2Q86UD0 394 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 TTC9BQ8N6N2 239 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 FNIP1Q8TF40 1166 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 CPLX3Q8WVH0 158 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 HNRNPLLQ8WVV9 542 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 ATG4CQ96DT6 458 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 SPATA25Q9BR10 227 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 C1QTNF3Q9BXJ4 246 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 RNF38Q9H0F5 515 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 ERVK13-1Q9NX77 482 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 FAN1Q9Y2M0 1017 aa4.52□□□□□ -1.69
R3HDM1-219ENST00000488035 SMAD7O15105 426 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 CNR2P34972 360 aa4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 GDF5P43026 501 aa4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 HMGA2P52926 109 aa4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 ARSHQ5FYA8 562 aa4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 NBPF12Q5TAG4 269 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 PAQR3Q6TCH7 311 aa4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 RBBP8NLQ8NC74 664 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-219ENST00000488035 SAMD11Q96NU1 681 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms