RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 HSF5Q4G112 596 aaPredicted RBP6.24□□□□□ -1.41
TTC3-220ENST00000487711 SLCO6A1Q86UG4 719 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 SIRT2Q8IXJ6 389 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 UBXN4Q92575 508 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 JMJD8Q96S16 334 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
TTC3-220ENST00000487711 NPHP3-ACAD11A0A0J9YXS1 232 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 A0A1W2PQU0 124 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 PAX4O43316 350 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 PAMP19021 973 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 HOXC12P31275 282 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 ECI1P42126 302 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 KCNJ6P48051 423 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 PPP2R2AP63151 447 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 LAPTM5Q13571 262 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 RASGRF1Q13972 1273 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 LIN37Q96GY3 246 aaPredicted RBP6.23□□□□□ -1.41
TTC3-220ENST00000487711 SGSM3Q96HU1 749 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 DEPDC7Q96QD5 511 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 SRPK1Q96SB4 655 aaKnown RBP6.23□□□□□ -1.41
TTC3-220ENST00000487711 PLCD4Q9BRC7 762 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 CWC22Q9HCG8 908 aaKnown RBP6.23□□□□□ -1.41
TTC3-220ENST00000487711 GPRC5CQ9NQ84 441 aa6.23□□□□□ -1.41
TTC3-220ENST00000487711 TRBV23OR9-2A0A075B6M9 112 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 ZNF503-AS2A6NEH8 195 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 EFEMP2O95967 443 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 THBDP07204 575 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 PLS3P13797 630 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 PRKCAP17252 672 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 CEBPAP49715 358 aaPredicted RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 IFRD2Q12894 506 aaPredicted RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 HSP90AA2PQ14568 343 aaPredicted RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 NLRX1Q86UT6 975 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 LRRC47Q8N1G4 583 aaKnown RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 NUP43Q8NFH3 380 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 COPS5Q92905 334 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 CCDC140Q96MF4 163 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 CLEC1BQ9P126 229 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 IMPACTQ9P2X3 320 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 PFDN2Q9UHV9 154 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 YBX2Q9Y2T7 364 aaKnown RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
TTC3-220ENST00000487711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
TTC3-220ENST00000487711 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 L1CAMP32004 1257 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 PDE6BP35913 854 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 GRIA2P42262 883 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.42
TTC3-220ENST00000487711 RASA3Q14644 834 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 KIR3DS1Q14943 382 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 SPATC1Q76KD6 591 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 CPNE8Q86YQ8 564 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 ZNF669Q96BR6 464 aaPredicted RBP6.21□□□□□ -1.42
TTC3-220ENST00000487711 SHISA4Q96DD7 197 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 OSBPL2Q9H1P3 480 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 SNTG2Q9NY99 539 aa6.21□□□□□ -1.42
TTC3-220ENST00000487711 A0A1W2PQJ5 194 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 FAM221BA6H8Z2 402 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.2□□□□□ -1.42
TTC3-220ENST00000487711 CPP00450 1065 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 ARL4AP40617 200 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 GFRA1P56159 465 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 CYP4F8P98187 520 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 SF1Q15637 639 aaKnown RBP6.2□□□□□ -1.42
TTC3-220ENST00000487711 MLANAQ16655 118 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 PRSS53Q2L4Q9 553 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 LRP10Q7Z4F1 713 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 MKL1Q969V6 931 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 INTS4Q96HW7 963 aaKnown RBP6.2□□□□□ -1.42
TTC3-220ENST00000487711 DIRC2Q96SL1 478 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
TTC3-220ENST00000487711 IER2Q9BTL4 223 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 CRTAC1Q9NQ79 661 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.2□□□□□ -1.42
TTC3-220ENST00000487711 USP35Q9P2H5 1018 aa6.2□□□□□ -1.42
TTC3-220ENST00000487711 SCG5P05408 212 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 PNLIPP16233 465 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
TTC3-220ENST00000487711 ADGRF1Q5T601 910 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 TMEM145Q8NBT3 493 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 NPLOC4Q8TAT6 608 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 FRS2Q8WU20 508 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 KCTD13Q8WZ19 329 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 NSUN3Q9H649 340 aaKnown RBP6.19□□□□□ -1.42
TTC3-220ENST00000487711 ARHGEF4Q9NR80 690 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 ACSL6Q9UKU0 697 aa6.19□□□□□ -1.42
TTC3-220ENST00000487711 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 MEFVO15553 781 aaPredicted RBP6.18□□□□□ -1.42
TTC3-220ENST00000487711 PRODHO43272 600 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 NPHS1O60500 1241 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 DIAPH1O60610 1272 aaKnown RBP6.18□□□□□ -1.42
TTC3-220ENST00000487711 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 MVKQ03426 396 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 CYP4F3Q08477 520 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 NFE2L2Q16236 605 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 IQCEQ6IPM2 695 aa6.18□□□□□ -1.42
TTC3-220ENST00000487711 PRR23BQ6ZRT6 265 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms